Gene : evm_27.TU.AmTr_v1.0_scaffold00088.73 A. trichopoda v1.0
Defline:  (1 of 1) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 Genomic Order:  71
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00088.73 Secondary Identifier:  ? PAC:31575250
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00088.73 0.5kb upstream 0.5kb upstream 3794 true AmTr_v1.0_scaffold00088: 1341100-1344893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00088: 1341100-1341599 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 0.5kb downstream 0.5kb downstream 3794 true AmTr_v1.0_scaffold00088: 1341600-1345393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00088: 1344894-1345393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 1.0kb upstream 1.0kb upstream 4294 true AmTr_v1.0_scaffold00088: 1340600-1344893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00088: 1340600-1341599 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 1.0kb downstream 1.0kb downstream 4294 true AmTr_v1.0_scaffold00088: 1341600-1345893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00088: 1344894-1345893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 2.0kb upstream 2.0kb upstream 5294 true AmTr_v1.0_scaffold00088: 1339600-1344893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00088: 1339600-1341599 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 2.0kb downstream 2.0kb downstream 5294 true AmTr_v1.0_scaffold00088: 1341600-1346893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00088: 1344894-1346893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 5.0kb upstream 5.0kb upstream 8294 true AmTr_v1.0_scaffold00088: 1336600-1344893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00088: 1336600-1341599 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 5.0kb downstream 5.0kb downstream 8294 true AmTr_v1.0_scaffold00088: 1341600-1349893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00088: 1344894-1349893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 10.0kb upstream 10.0kb upstream 13294 true AmTr_v1.0_scaffold00088: 1331600-1344893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00088: 1331600-1341599 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 10.0kb downstream 10.0kb downstream 13294 true AmTr_v1.0_scaffold00088: 1341600-1354893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.73 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00088: 1344894-1354893 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048746 5273 Angiosperm View MSA
121311093 5274 Embryophyte View MSA
123348440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain