Gene : Cagra.3936s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 Genomic Order:  1
Name:  ? Cagra.3936s0001 Secondary Identifier:  ? PAC:28897946
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3936s0001 0.5kb upstream 0.5kb upstream 527 true Scaffold3936: 485-1011 Capsella grandiflora
Cagra.3936s0001 0.5kb upstream 0.5kb upstream 17 false Scaffold3936: 995-1011 Capsella grandiflora
Cagra.3936s0001 0.5kb downstream 0.5kb downstream 994 true Scaffold3936: 1-994 Capsella grandiflora
Cagra.3936s0001 0.5kb downstream 0.5kb downstream 484 false Scaffold3936: 1-484 Capsella grandiflora
Cagra.3936s0001 1.0kb upstream 1.0kb upstream 527 true Scaffold3936: 485-1011 Capsella grandiflora
Cagra.3936s0001 1.0kb upstream 1.0kb upstream 17 false Scaffold3936: 995-1011 Capsella grandiflora
Cagra.3936s0001 1.0kb downstream 1.0kb downstream 994 true Scaffold3936: 1-994 Capsella grandiflora
Cagra.3936s0001 1.0kb downstream 1.0kb downstream 484 false Scaffold3936: 1-484 Capsella grandiflora
Cagra.3936s0001 2.0kb upstream 2.0kb upstream 527 true Scaffold3936: 485-1011 Capsella grandiflora
Cagra.3936s0001 2.0kb upstream 2.0kb upstream 17 false Scaffold3936: 995-1011 Capsella grandiflora
Cagra.3936s0001 2.0kb downstream 2.0kb downstream 994 true Scaffold3936: 1-994 Capsella grandiflora
Cagra.3936s0001 2.0kb downstream 2.0kb downstream 484 false Scaffold3936: 1-484 Capsella grandiflora
Cagra.3936s0001 5.0kb upstream 5.0kb upstream 527 true Scaffold3936: 485-1011 Capsella grandiflora
Cagra.3936s0001 5.0kb upstream 5.0kb upstream 17 false Scaffold3936: 995-1011 Capsella grandiflora
Cagra.3936s0001 5.0kb downstream 5.0kb downstream 994 true Scaffold3936: 1-994 Capsella grandiflora
Cagra.3936s0001 5.0kb downstream 5.0kb downstream 484 false Scaffold3936: 1-484 Capsella grandiflora
Cagra.3936s0001 10.0kb upstream 10.0kb upstream 527 true Scaffold3936: 485-1011 Capsella grandiflora
Cagra.3936s0001 10.0kb upstream 10.0kb upstream 17 false Scaffold3936: 995-1011 Capsella grandiflora
Cagra.3936s0001 10.0kb downstream 10.0kb downstream 994 true Scaffold3936: 1-994 Capsella grandiflora
Cagra.3936s0001 10.0kb downstream 10.0kb downstream 484 false Scaffold3936: 1-484 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378580 5261 Brassicaceae View MSA
123836516 5264 Brassicales-Malvales View MSA
124343954 5266 SBM View MSA
124252850 5268 Malvidae View MSA
124064557 5270 Rosid View MSA
123737242 5271 Pentapetalae View MSA
122793388 5272 Eudicot View MSA
122048746 5273 Angiosperm View MSA
121311093 5274 Embryophyte View MSA
123348440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain