Protein Family : RNA ligase/cyclic nucleotide phosphodiesterase family protein 124252850

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  32

32 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29822.t000055 (1 of 1) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 R. communis v0.1 552   29822: 274429-274980
orange1.1g040775m.g (1 of 1) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 C. sinensis v1.1 552   scaffold00028: 641080-641631
AT5G40190 (1 of 2) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 A. thaliana TAIR10 772   Chr5: 16069177-16069948
AT3G28140 (1 of 2) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 A. thaliana TAIR10 988   Chr3: 10470401-10471388
Thhalv10027951m.g (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 E. salsugineum v1.0 895   scaffold_14: 3695670-3696564
Thhalv10005667m.g (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 E. salsugineum v1.0 552   scaffold_6: 5723438-5723989
Ciclev10016872m.g (1 of 1) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 C. clementina v1.0 1505   scaffold_2: 8750430-8751934
Lus10039437.g (1 of 4) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 L. usitatissimum v1.0 549   scaffold33: 1636161-1636709
Lus10039477.g (1 of 4) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 L. usitatissimum v1.0 549   scaffold33: 2065538-2066086
Lus10032164.g (1 of 4) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 L. usitatissimum v1.0 561   scaffold42: 1199048-1199608
Lus10014523.g (1 of 4) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 L. usitatissimum v1.0 561   scaffold107: 128833-129393
Gorai.012G059600 (1 of 3) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 G. raimondii v2.1 2949   Chr12: 8360879-8363827
Gorai.006G028500 (1 of 3) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 G. raimondii v2.1 4042   Chr06: 7295150-7299191
Gorai.011G096000 (1 of 3) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 G. raimondii v2.1 1372   Chr11: 10577920-10579291
Thecc1EG016829 (1 of 1) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 T. cacao v1.1 3179   scaffold_4: 389440-392618
Araha.16057s0007 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 A. halleri v1.1 555   Scaffold16057: 55411-55965
Araha.8967s0002 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 A. halleri v1.1 878   Scaffold8967: 5831-6708
Cagra.3936s0001 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 C. grandiflora v1.1 510   Scaffold3936: 485-994
Cagra.8568s0004 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 C. grandiflora v1.1 804   Scaffold8568: 17629-18432
Brara.F03161 (1 of 1) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 B. rapa FPsc v1.3 1368   A06: 25003786-25005153
Bostr.3751s0016 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 B. stricta v1.2 1284   Scaffold3751: 209247-210530
Bostr.0556s0480 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 B. stricta v1.2 1107   Scaffold556: 2931620-2932726
SapurV1A.0297s0220 (1 of 2) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 S. purpurea v1.0 1363   chr16: 21795428-21796790
SapurV1A.1642s0010 (1 of 2) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 S. purpurea v1.0 1179   chr16: 21790599-21791777
Manes.15G180000 (1 of 3) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 M. esculenta v6.1 1337   Chromosome15: 18617829-18619165
Manes.17G124400 (1 of 3) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 M. esculenta v6.1 2378   Chromosome17: 27336375-27338752
AL5G17640 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 A. lyrata v2.1 1655   scaffold_5: 4329678-4331332
AL7G49820 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 A. lyrata v2.1 1426   scaffold_7: 22521622-22523047
Potri.001G350300 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 P. trichocarpa v3.1 1275   Chr01: 35700126-35701400
Podel.01G373200 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 P. deltoides WV94 v2.1 1052   Chr01: 38901675-38902726

32 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g040775m C. sinensis v1.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5268 Malvidae
AT3G28140.1 A. thaliana TAIR10 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
Thhalv10027951m E. salsugineum v1.0 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
Lus10039437 L. usitatissimum v1.0 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 4 5268 Malvidae
Lus10039477 L. usitatissimum v1.0 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 4 5268 Malvidae
Araha.8967s0002.1.p A. halleri v1.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
Cagra.8568s0004.1.p C. grandiflora v1.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
Bostr.3751s0016.1.p B. stricta v1.2 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
Manes.15G180000.1.p M. esculenta v6.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
Potri.001G350300.1.p P. trichocarpa v3.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5268 Malvidae
Podel.01G373200.1.p P. deltoides WV94 v2.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5268 Malvidae
29822.m003380 R. communis v0.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5268 Malvidae
AT5G40190.1 A. thaliana TAIR10 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
Thhalv10005667m E. salsugineum v1.0 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
Ciclev10016872m C. clementina v1.0 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5268 Malvidae
Lus10032164 L. usitatissimum v1.0 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 4 5268 Malvidae
Lus10014523 L. usitatissimum v1.0 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 4 5268 Malvidae
Gorai.006G028500.1 G. raimondii v2.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 3 5268 Malvidae
Gorai.011G096000.1 G. raimondii v2.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 3 5268 Malvidae
Gorai.012G059600.1 G. raimondii v2.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 3 5268 Malvidae
Thecc1EG016829t2 T. cacao v1.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5268 Malvidae
Araha.16057s0007.1.p A. halleri v1.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
Cagra.3936s0001.1.p C. grandiflora v1.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
Brara.F03161.1.p B. rapa FPsc v1.3 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5268 Malvidae
Bostr.0556s0480.1.p B. stricta v1.2 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
SapurV1A.0297s0220.1.p S. purpurea v1.0 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
SapurV1A.1642s0010.1.p S. purpurea v1.0 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
Manes.17G124400.1.p M. esculenta v6.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
AL5G17640.t1 A. lyrata v2.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae
AL7G49820.t1 A. lyrata v2.1 124252850 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5268 Malvidae