Gene : Glyma.02G121300 G. max Wm82.a2.v1
Defline:  (1 of 46) PF03110 - SBP domain (SBP) Genomic Order:  1213
Name:  ? Glyma.02G121300 Secondary Identifier:  ? PAC:30507921
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G121300 0.5kb upstream 0.5kb upstream 7064 true Chr02: 12006724-12013787 Glycine max
Glyma.02G121300 0.5kb upstream 0.5kb upstream 500 false Chr02: 12013288-12013787 Glycine max
Glyma.02G121300 0.5kb downstream 0.5kb downstream 7064 true Chr02: 12006224-12013287 Glycine max
Glyma.02G121300 0.5kb downstream 0.5kb downstream 500 false Chr02: 12006224-12006723 Glycine max
Glyma.02G121300 1.0kb upstream 1.0kb upstream 7564 true Chr02: 12006724-12014287 Glycine max
Glyma.02G121300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12013288-12014287 Glycine max
Glyma.02G121300 1.0kb downstream 1.0kb downstream 7564 true Chr02: 12005724-12013287 Glycine max
Glyma.02G121300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12005724-12006723 Glycine max
Glyma.02G121300 2.0kb upstream 2.0kb upstream 8564 true Chr02: 12006724-12015287 Glycine max
Glyma.02G121300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12013288-12015287 Glycine max
Glyma.02G121300 2.0kb downstream 2.0kb downstream 8564 true Chr02: 12004724-12013287 Glycine max
Glyma.02G121300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12004724-12006723 Glycine max
Glyma.02G121300 5.0kb upstream 5.0kb upstream 11564 true Chr02: 12006724-12018287 Glycine max
Glyma.02G121300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12013288-12018287 Glycine max
Glyma.02G121300 5.0kb downstream 5.0kb downstream 11564 true Chr02: 12001724-12013287 Glycine max
Glyma.02G121300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12001724-12006723 Glycine max
Glyma.02G121300 10.0kb upstream 10.0kb upstream 16564 true Chr02: 12006724-12023287 Glycine max
Glyma.02G121300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12013288-12023287 Glycine max
Glyma.02G121300 10.0kb downstream 10.0kb downstream 16564 true Chr02: 11996724-12013287 Glycine max
Glyma.02G121300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 11996724-12006723 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304141 5265 Fabidae View MSA
124069639 5270 Rosid View MSA
123751370 5271 Pentapetalae View MSA
122794305 5272 Eudicot View MSA
122050333 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351727 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.39267 0.0 14.3894    
cufflinks 6.26198 0.0 25.4745    
cufflinks 3.15724 0.0 11.7778    
cufflinks 1.9228 0.0 10.1063    
cufflinks 3.13258 0.0 13.6189    
cufflinks 2.55768 0.0 10.3752    
cufflinks 1.02338 0.0 6.35553   Low
cufflinks 6.39038 0.0 23.1489   High
cufflinks 7.33818 0.0 28.791   High
cufflinks 1.385       High
cufflinks 0.065       Low
cufflinks 0.523        
cufflinks 0.846        
cufflinks 0.547        
cufflinks 0.019     Low Low
cufflinks 0.494        
cufflinks 0.434        
cufflinks 0.284        
cufflinks 0.994       High
cufflinks 0.306        
cufflinks 0.095       Low
cufflinks 0.432        
cufflinks 0.624        
cufflinks 0.08       Low
cufflinks 0.39        
cufflinks 0.204        

0 Strain