Gene : Glyma.02G306200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31636:SF38 - SCARECROW-LIKE PROTEIN 21-RELATED Genomic Order:  3062
Name:  ? Glyma.02G306200 Secondary Identifier:  ? PAC:30510136
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G306200 0.5kb upstream 0.5kb upstream 4083 true Chr02: 48087700-48091782 Glycine max
Glyma.02G306200 0.5kb upstream 0.5kb upstream 500 false Chr02: 48087700-48088199 Glycine max
Glyma.02G306200 0.5kb downstream 0.5kb downstream 4083 true Chr02: 48088200-48092282 Glycine max
Glyma.02G306200 0.5kb downstream 0.5kb downstream 500 false Chr02: 48091783-48092282 Glycine max
Glyma.02G306200 1.0kb upstream 1.0kb upstream 4583 true Chr02: 48087200-48091782 Glycine max
Glyma.02G306200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48087200-48088199 Glycine max
Glyma.02G306200 1.0kb downstream 1.0kb downstream 4583 true Chr02: 48088200-48092782 Glycine max
Glyma.02G306200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48091783-48092782 Glycine max
Glyma.02G306200 2.0kb upstream 2.0kb upstream 5583 true Chr02: 48086200-48091782 Glycine max
Glyma.02G306200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48086200-48088199 Glycine max
Glyma.02G306200 2.0kb downstream 2.0kb downstream 5583 true Chr02: 48088200-48093782 Glycine max
Glyma.02G306200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48091783-48093782 Glycine max
Glyma.02G306200 5.0kb upstream 5.0kb upstream 8583 true Chr02: 48083200-48091782 Glycine max
Glyma.02G306200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48083200-48088199 Glycine max
Glyma.02G306200 5.0kb downstream 5.0kb downstream 8583 true Chr02: 48088200-48096782 Glycine max
Glyma.02G306200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48091783-48096782 Glycine max
Glyma.02G306200 10.0kb upstream 10.0kb upstream 13583 true Chr02: 48078200-48091782 Glycine max
Glyma.02G306200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48078200-48088199 Glycine max
Glyma.02G306200 10.0kb downstream 10.0kb downstream 13583 true Chr02: 48088200-48101782 Glycine max
Glyma.02G306200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48091783-48101782 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122241548 5265 Fabidae Singleton cluster - no MSA
124064527 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.20728 0.0 31.8165    
cufflinks 6.54887 0.0 28.423   Low
cufflinks 9.22096 0.0 37.8281    
cufflinks 13.1095 0.0 52.8541   High
cufflinks 8.30434 0.0 31.7816    
cufflinks 15.5792 0.0 63.2397   High
cufflinks 8.37922 0.0 34.9211    
cufflinks 12.3635 0.0 49.8126    
cufflinks 9.64695 0.0 39.7352    
cufflinks 2.148        
cufflinks 2.492       High
cufflinks 1.944        
cufflinks 3.33       High
cufflinks 2.106        
cufflinks 0.747       Low
cufflinks 1.274        
cufflinks 0.813       Low
cufflinks 1.471        
cufflinks 1.088        
cufflinks 1.134        
cufflinks 2.329        
cufflinks 1.31        
cufflinks 1.289        
cufflinks 3.127       High
cufflinks 1.239        
cufflinks 1.714        

0 Strain