Gene : Glyma.02G309900 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.7.7.15 - Choline-phosphate cytidylyltransferase / Phosphorylcholine transferase Genomic Order:  3099
Name:  ? Glyma.02G309900 Secondary Identifier:  ? PAC:30507209
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3561 Glycine max pathologic  
Gmax PWY3O-450 Glycine max pathologic  
Gmax PWY4FS-2 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G309900 0.5kb upstream 0.5kb upstream 4089 true Chr02: 48310026-48314114 Glycine max
Glyma.02G309900 0.5kb upstream 0.5kb upstream 500 false Chr02: 48310026-48310525 Glycine max
Glyma.02G309900 0.5kb downstream 0.5kb downstream 4089 true Chr02: 48310526-48314614 Glycine max
Glyma.02G309900 0.5kb downstream 0.5kb downstream 500 false Chr02: 48314115-48314614 Glycine max
Glyma.02G309900 1.0kb upstream 1.0kb upstream 4589 true Chr02: 48309526-48314114 Glycine max
Glyma.02G309900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48309526-48310525 Glycine max
Glyma.02G309900 1.0kb downstream 1.0kb downstream 4589 true Chr02: 48310526-48315114 Glycine max
Glyma.02G309900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48314115-48315114 Glycine max
Glyma.02G309900 2.0kb upstream 2.0kb upstream 5589 true Chr02: 48308526-48314114 Glycine max
Glyma.02G309900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48308526-48310525 Glycine max
Glyma.02G309900 2.0kb downstream 2.0kb downstream 5589 true Chr02: 48310526-48316114 Glycine max
Glyma.02G309900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48314115-48316114 Glycine max
Glyma.02G309900 5.0kb upstream 5.0kb upstream 8589 true Chr02: 48305526-48314114 Glycine max
Glyma.02G309900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48305526-48310525 Glycine max
Glyma.02G309900 5.0kb downstream 5.0kb downstream 8589 true Chr02: 48310526-48319114 Glycine max
Glyma.02G309900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48314115-48319114 Glycine max
Glyma.02G309900 10.0kb upstream 10.0kb upstream 13589 true Chr02: 48300526-48314114 Glycine max
Glyma.02G309900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48300526-48310525 Glycine max
Glyma.02G309900 10.0kb downstream 10.0kb downstream 13589 true Chr02: 48310526-48324114 Glycine max
Glyma.02G309900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48314115-48324114 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306128 5265 Fabidae View MSA
124069985 5270 Rosid View MSA
123749333 5271 Pentapetalae View MSA
122792398 5272 Eudicot View MSA
122047197 5273 Angiosperm View MSA
121348751 5274 Embryophyte View MSA
123428717 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.0455 0.0 67.0039 High High
cufflinks 17.0886 0.0 45.6455   Low
cufflinks 20.9127 0.0 55.8025 High  
cufflinks 22.285 0.0 59.5068 High  
cufflinks 24.009 0.0 64.1951 High  
cufflinks 24.8318 0.0 66.4169 High High
cufflinks 18.3047 0.0 48.8503   Low
cufflinks 22.9897 0.0 61.4056 High  
cufflinks 21.2655 0.0 56.7447 High  
cufflinks 8.364     High  
cufflinks 13.04     High High
cufflinks 10.954     High  
cufflinks 11.502     High  
cufflinks 13.613     High High
cufflinks 7.473     High  
cufflinks 6.413        
cufflinks 7.462     High  
cufflinks 9.803     High  
cufflinks 9.148     High  
cufflinks 5.596       Low
cufflinks 9.077     High  
cufflinks 6.689        
cufflinks 5.158       Low
cufflinks 13.428     High High
cufflinks 5.905       Low
cufflinks 8.281     High  

0 Strain