Gene : Glyma.03G004300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22778//PTHR22778:SF22 - OVARIAN CANCER GENE-2 PROTEIN-RELATED Genomic Order:  43
Name:  ? Glyma.03G004300 Secondary Identifier:  ? PAC:30515994
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3841 Glycine max pathologic  
Gmax PWY-6612 Glycine max pathologic  
Gmax PWY-6614 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G004300 0.5kb upstream 0.5kb upstream 2394 true Chr03: 375232-377625 Glycine max
Glyma.03G004300 0.5kb upstream 0.5kb upstream 500 false Chr03: 375232-375731 Glycine max
Glyma.03G004300 0.5kb downstream 0.5kb downstream 2394 true Chr03: 375732-378125 Glycine max
Glyma.03G004300 0.5kb downstream 0.5kb downstream 500 false Chr03: 377626-378125 Glycine max
Glyma.03G004300 1.0kb upstream 1.0kb upstream 2894 true Chr03: 374732-377625 Glycine max
Glyma.03G004300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 374732-375731 Glycine max
Glyma.03G004300 1.0kb downstream 1.0kb downstream 2894 true Chr03: 375732-378625 Glycine max
Glyma.03G004300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 377626-378625 Glycine max
Glyma.03G004300 2.0kb upstream 2.0kb upstream 3894 true Chr03: 373732-377625 Glycine max
Glyma.03G004300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 373732-375731 Glycine max
Glyma.03G004300 2.0kb downstream 2.0kb downstream 3894 true Chr03: 375732-379625 Glycine max
Glyma.03G004300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 377626-379625 Glycine max
Glyma.03G004300 5.0kb upstream 5.0kb upstream 6894 true Chr03: 370732-377625 Glycine max
Glyma.03G004300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 370732-375731 Glycine max
Glyma.03G004300 5.0kb downstream 5.0kb downstream 6894 true Chr03: 375732-382625 Glycine max
Glyma.03G004300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 377626-382625 Glycine max
Glyma.03G004300 10.0kb upstream 10.0kb upstream 11894 true Chr03: 365732-377625 Glycine max
Glyma.03G004300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 365732-375731 Glycine max
Glyma.03G004300 10.0kb downstream 10.0kb downstream 11894 true Chr03: 375732-387625 Glycine max
Glyma.03G004300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 377626-387625 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309691 5265 Fabidae View MSA
124070831 5270 Rosid View MSA
123747932 5271 Pentapetalae View MSA
122794678 5272 Eudicot View MSA
122048467 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348869 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4996 0.0 55.8283    
cufflinks 11.718 0.0 53.498    
cufflinks 4.77719 0.0 27.7558   Low
cufflinks 27.9891 0.0 113.82 High  
cufflinks 44.6373 0.0 183.309 High  
cufflinks 90.6045 0.0 364.081 High High
cufflinks 17.8186 0.0 63.8578    
cufflinks 21.4304 0.0 89.5546 High  
cufflinks 40.1337 0.0 139.293 High  
cufflinks 6.044        
cufflinks 3.948        
cufflinks 2.158        
cufflinks 26.697     High High
cufflinks 18.587     High High
cufflinks 1.378       Low
cufflinks 2.098        
cufflinks 13.195     High High
cufflinks 9.089     High  
cufflinks 5.095        
cufflinks 1.202       Low
cufflinks 4.001        
cufflinks 3.116        
cufflinks 5.713        
cufflinks 6.759     High  
cufflinks 1.539       Low
cufflinks 9.694     High  

0 Strain