Gene : Glyma.03G015400 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR10774//PTHR10774:SF58 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  154
Name:  ? Glyma.03G015400 Secondary Identifier:  ? PAC:30515942
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G015400 0.5kb upstream 0.5kb upstream 2935 true Chr03: 1531683-1534617 Glycine max
Glyma.03G015400 0.5kb upstream 0.5kb upstream 500 false Chr03: 1534118-1534617 Glycine max
Glyma.03G015400 0.5kb downstream 0.5kb downstream 2935 true Chr03: 1531183-1534117 Glycine max
Glyma.03G015400 0.5kb downstream 0.5kb downstream 500 false Chr03: 1531183-1531682 Glycine max
Glyma.03G015400 1.0kb upstream 1.0kb upstream 3435 true Chr03: 1531683-1535117 Glycine max
Glyma.03G015400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1534118-1535117 Glycine max
Glyma.03G015400 1.0kb downstream 1.0kb downstream 3435 true Chr03: 1530683-1534117 Glycine max
Glyma.03G015400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1530683-1531682 Glycine max
Glyma.03G015400 2.0kb upstream 2.0kb upstream 4435 true Chr03: 1531683-1536117 Glycine max
Glyma.03G015400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1534118-1536117 Glycine max
Glyma.03G015400 2.0kb downstream 2.0kb downstream 4435 true Chr03: 1529683-1534117 Glycine max
Glyma.03G015400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1529683-1531682 Glycine max
Glyma.03G015400 5.0kb upstream 5.0kb upstream 7435 true Chr03: 1531683-1539117 Glycine max
Glyma.03G015400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1534118-1539117 Glycine max
Glyma.03G015400 5.0kb downstream 5.0kb downstream 7435 true Chr03: 1526683-1534117 Glycine max
Glyma.03G015400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1526683-1531682 Glycine max
Glyma.03G015400 10.0kb upstream 10.0kb upstream 12435 true Chr03: 1531683-1544117 Glycine max
Glyma.03G015400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1534118-1544117 Glycine max
Glyma.03G015400 10.0kb downstream 10.0kb downstream 12435 true Chr03: 1521683-1534117 Glycine max
Glyma.03G015400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1521683-1531682 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308994 5265 Fabidae View MSA
124062814 5270 Rosid View MSA
123751939 5271 Pentapetalae View MSA
122788067 5272 Eudicot View MSA
122043310 5273 Angiosperm View MSA
121351694 5274 Embryophyte View MSA
123426112 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.746 0.0 14.9545   Low
cufflinks 18.246 0.0 49.3745    
cufflinks 18.6895 0.0 50.4003    
cufflinks 40.5407 0.0 108.631 High  
cufflinks 91.3978 0.0 259.549 High  
cufflinks 120.865 0.0 356.783 High High
cufflinks 40.2675 0.0 107.756 High  
cufflinks 120.342 0.0 356.278 High High
cufflinks 55.9693 0.0 152.208 High  
cufflinks 31.372     High High
cufflinks 9.998     High  
cufflinks 8.135     High  
cufflinks 46.475     High High
cufflinks 49.159     High High
cufflinks 5.237     High  
cufflinks 3.511        
cufflinks 25.038     High  
cufflinks 12.646     High  
cufflinks 8.012     High  
cufflinks 1.863       Low
cufflinks 15.548     High  
cufflinks 2.219       Low
cufflinks 1.397       Low
cufflinks 13.623     High  
cufflinks 2.441       Low
cufflinks 19.764     High  

0 Strain