Gene : Glyma.19G058900 G. max Wm82.a2.v1
Defline:  (1 of 24) PTHR31238:SF42 - GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 10-RELATED Genomic Order:  589
Name:  ? Glyma.19G058900 Secondary Identifier:  ? PAC:30514651
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G058900 0.5kb upstream 0.5kb upstream 1555 true Chr19: 11368106-11369660 Glycine max
Glyma.19G058900 0.5kb upstream 0.5kb upstream 500 false Chr19: 11368106-11368605 Glycine max
Glyma.19G058900 0.5kb downstream 0.5kb downstream 1555 true Chr19: 11368606-11370160 Glycine max
Glyma.19G058900 0.5kb downstream 0.5kb downstream 500 false Chr19: 11369661-11370160 Glycine max
Glyma.19G058900 1.0kb upstream 1.0kb upstream 2055 true Chr19: 11367606-11369660 Glycine max
Glyma.19G058900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 11367606-11368605 Glycine max
Glyma.19G058900 1.0kb downstream 1.0kb downstream 2055 true Chr19: 11368606-11370660 Glycine max
Glyma.19G058900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 11369661-11370660 Glycine max
Glyma.19G058900 2.0kb upstream 2.0kb upstream 3055 true Chr19: 11366606-11369660 Glycine max
Glyma.19G058900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 11366606-11368605 Glycine max
Glyma.19G058900 2.0kb downstream 2.0kb downstream 3055 true Chr19: 11368606-11371660 Glycine max
Glyma.19G058900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 11369661-11371660 Glycine max
Glyma.19G058900 5.0kb upstream 5.0kb upstream 6055 true Chr19: 11363606-11369660 Glycine max
Glyma.19G058900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 11363606-11368605 Glycine max
Glyma.19G058900 5.0kb downstream 5.0kb downstream 6055 true Chr19: 11368606-11374660 Glycine max
Glyma.19G058900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 11369661-11374660 Glycine max
Glyma.19G058900 10.0kb upstream 10.0kb upstream 11055 true Chr19: 11358606-11369660 Glycine max
Glyma.19G058900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 11358606-11368605 Glycine max
Glyma.19G058900 10.0kb downstream 10.0kb downstream 11055 true Chr19: 11368606-11379660 Glycine max
Glyma.19G058900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 11369661-11379660 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314979 5265 Fabidae View MSA
124073814 5270 Rosid View MSA
123752925 5271 Pentapetalae View MSA
122797163 5272 Eudicot View MSA
122049786 5273 Angiosperm View MSA
121349986 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0267735 0.0 0.120974 Low  
cufflinks 0.0089645 0.0 0.0454231 Low Low
cufflinks 1.09649 0.0 4.04314    
cufflinks 0.089569 0.0 0.367772 Low  
cufflinks 3.77975 0.0 12.6322   High
cufflinks 4.31902 0.0 14.1751   High
cufflinks 0.0150044 0.0 0.0718158 Low Low
cufflinks 0.0746491 0.0 0.309774 Low  
cufflinks 1.63987 0.0 5.90714    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  

0 Strain