Gene : Glyma.03G049600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32285:SF32 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 35 Genomic Order:  496
Name:  ? Glyma.03G049600 Secondary Identifier:  ? PAC:30517742
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G049600 0.5kb upstream 0.5kb upstream 6928 true Chr03: 6474951-6481878 Glycine max
Glyma.03G049600 0.5kb upstream 0.5kb upstream 500 false Chr03: 6481379-6481878 Glycine max
Glyma.03G049600 0.5kb downstream 0.5kb downstream 6928 true Chr03: 6474451-6481378 Glycine max
Glyma.03G049600 0.5kb downstream 0.5kb downstream 500 false Chr03: 6474451-6474950 Glycine max
Glyma.03G049600 1.0kb upstream 1.0kb upstream 7428 true Chr03: 6474951-6482378 Glycine max
Glyma.03G049600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6481379-6482378 Glycine max
Glyma.03G049600 1.0kb downstream 1.0kb downstream 7428 true Chr03: 6473951-6481378 Glycine max
Glyma.03G049600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6473951-6474950 Glycine max
Glyma.03G049600 2.0kb upstream 2.0kb upstream 8428 true Chr03: 6474951-6483378 Glycine max
Glyma.03G049600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6481379-6483378 Glycine max
Glyma.03G049600 2.0kb downstream 2.0kb downstream 8428 true Chr03: 6472951-6481378 Glycine max
Glyma.03G049600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6472951-6474950 Glycine max
Glyma.03G049600 5.0kb upstream 5.0kb upstream 11428 true Chr03: 6474951-6486378 Glycine max
Glyma.03G049600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6481379-6486378 Glycine max
Glyma.03G049600 5.0kb downstream 5.0kb downstream 11428 true Chr03: 6469951-6481378 Glycine max
Glyma.03G049600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6469951-6474950 Glycine max
Glyma.03G049600 10.0kb upstream 10.0kb upstream 16428 true Chr03: 6474951-6491378 Glycine max
Glyma.03G049600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6481379-6491378 Glycine max
Glyma.03G049600 10.0kb downstream 10.0kb downstream 16428 true Chr03: 6464951-6481378 Glycine max
Glyma.03G049600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6464951-6474950 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306540 5265 Fabidae View MSA
124069147 5270 Rosid View MSA
123738622 5271 Pentapetalae View MSA
122795590 5272 Eudicot View MSA
122045837 5273 Angiosperm View MSA
121310513 5274 Embryophyte View MSA
123347976 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.55923 0.0 31.8717    
cufflinks 4.60691 0.0 24.8372    
cufflinks 2.36438 0.0 12.243   Low
cufflinks 8.89394 0.0 41.4772    
cufflinks 9.49025 0.0 42.331    
cufflinks 9.24125 0.0 40.4316    
cufflinks 5.98333 0.0 29.6191    
cufflinks 10.4107 0.0 40.3684   High
cufflinks 5.54967 0.0 28.3021    
cufflinks 0.606       High
cufflinks 0.132       Low
cufflinks 0.265        
cufflinks 0.764       High
cufflinks 0.928       High
cufflinks 0.106       Low
cufflinks 0.296        
cufflinks 0.348        
cufflinks 0.429        
cufflinks 0.329        
cufflinks 0.234        
cufflinks 0.199        
cufflinks 0.294        
cufflinks 0.348        
cufflinks 0.216        
cufflinks 0.23        
cufflinks 0.203        

0 Strain