Gene : Glyma.03G058300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Genomic Order:  583
Name:  ? Glyma.03G058300 Secondary Identifier:  ? PAC:30515739
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G058300 0.5kb upstream 0.5kb upstream 8105 true Chr03: 8280286-8288390 Glycine max
Glyma.03G058300 0.5kb upstream 0.5kb upstream 500 false Chr03: 8280286-8280785 Glycine max
Glyma.03G058300 0.5kb downstream 0.5kb downstream 8105 true Chr03: 8280786-8288890 Glycine max
Glyma.03G058300 0.5kb downstream 0.5kb downstream 500 false Chr03: 8288391-8288890 Glycine max
Glyma.03G058300 1.0kb upstream 1.0kb upstream 8605 true Chr03: 8279786-8288390 Glycine max
Glyma.03G058300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8279786-8280785 Glycine max
Glyma.03G058300 1.0kb downstream 1.0kb downstream 8605 true Chr03: 8280786-8289390 Glycine max
Glyma.03G058300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8288391-8289390 Glycine max
Glyma.03G058300 2.0kb upstream 2.0kb upstream 9605 true Chr03: 8278786-8288390 Glycine max
Glyma.03G058300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8278786-8280785 Glycine max
Glyma.03G058300 2.0kb downstream 2.0kb downstream 9605 true Chr03: 8280786-8290390 Glycine max
Glyma.03G058300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8288391-8290390 Glycine max
Glyma.03G058300 5.0kb upstream 5.0kb upstream 12605 true Chr03: 8275786-8288390 Glycine max
Glyma.03G058300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8275786-8280785 Glycine max
Glyma.03G058300 5.0kb downstream 5.0kb downstream 12605 true Chr03: 8280786-8293390 Glycine max
Glyma.03G058300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8288391-8293390 Glycine max
Glyma.03G058300 10.0kb upstream 10.0kb upstream 17605 true Chr03: 8270786-8288390 Glycine max
Glyma.03G058300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8270786-8280785 Glycine max
Glyma.03G058300 10.0kb downstream 10.0kb downstream 17605 true Chr03: 8280786-8298390 Glycine max
Glyma.03G058300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8288391-8298390 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297107 5265 Fabidae View MSA
124065189 5270 Rosid View MSA
123739014 5271 Pentapetalae View MSA
122792056 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.755539 0.0 6.12109    
cufflinks 0.0695405 0.0 0.280751 Low Low
cufflinks 0.790932 0.0 4.62649    
cufflinks 15.535 0.0 64.9435   High
cufflinks 0.597434 0.0 3.63102    
cufflinks 0.332307 0.0 1.65599    
cufflinks 24.7556 0.0 104.438 High High
cufflinks 1.26553 0.0 8.33732    
cufflinks 0.61936 0.0 4.53836    
cufflinks 0.104        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.071     Low  
cufflinks 0.003     Low Low
cufflinks 0.02     Low  
cufflinks 0.008     Low Low
cufflinks 0.111        
cufflinks 0.009     Low Low
cufflinks 0.305       High
cufflinks 0.043     Low  
cufflinks 0.068     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.086     Low  
cufflinks 0.432       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.079     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain