Gene : Glyma.19G048700 G. max Wm82.a2.v1
Defline:  (1 of 29) PTHR31790:SF10 - F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  487
Name:  ? Glyma.19G048700 Secondary Identifier:  ? PAC:30513153
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G048700 0.5kb upstream 0.5kb upstream 1658 true Chr19: 7740547-7742204 Glycine max
Glyma.19G048700 0.5kb upstream 0.5kb upstream 500 false Chr19: 7741705-7742204 Glycine max
Glyma.19G048700 0.5kb downstream 0.5kb downstream 1658 true Chr19: 7740047-7741704 Glycine max
Glyma.19G048700 0.5kb downstream 0.5kb downstream 500 false Chr19: 7740047-7740546 Glycine max
Glyma.19G048700 1.0kb upstream 1.0kb upstream 2158 true Chr19: 7740547-7742704 Glycine max
Glyma.19G048700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 7741705-7742704 Glycine max
Glyma.19G048700 1.0kb downstream 1.0kb downstream 2158 true Chr19: 7739547-7741704 Glycine max
Glyma.19G048700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 7739547-7740546 Glycine max
Glyma.19G048700 2.0kb upstream 2.0kb upstream 3158 true Chr19: 7740547-7743704 Glycine max
Glyma.19G048700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 7741705-7743704 Glycine max
Glyma.19G048700 2.0kb downstream 2.0kb downstream 3158 true Chr19: 7738547-7741704 Glycine max
Glyma.19G048700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 7738547-7740546 Glycine max
Glyma.19G048700 5.0kb upstream 5.0kb upstream 6158 true Chr19: 7740547-7746704 Glycine max
Glyma.19G048700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 7741705-7746704 Glycine max
Glyma.19G048700 5.0kb downstream 5.0kb downstream 6158 true Chr19: 7735547-7741704 Glycine max
Glyma.19G048700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 7735547-7740546 Glycine max
Glyma.19G048700 10.0kb upstream 10.0kb upstream 11158 true Chr19: 7740547-7751704 Glycine max
Glyma.19G048700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 7741705-7751704 Glycine max
Glyma.19G048700 10.0kb downstream 10.0kb downstream 11158 true Chr19: 7730547-7741704 Glycine max
Glyma.19G048700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 7730547-7740546 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315521 5265 Fabidae View MSA
124040737 5270 Rosid View MSA
123754486 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0764408 0.0 0.314123 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0209907 0.0 0.0955719 Low  
cufflinks 0.0245475 0.0 0.110213 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain