Gene : Glyma.02G290500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24031:SF54 - ATP-DEPENDENT RNA HELICASE DDX10-RELATED Genomic Order:  2905
Name:  ? Glyma.02G290500 Secondary Identifier:  ? PAC:30507797
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G290500 0.5kb upstream 0.5kb upstream 5202 true Chr02: 47007571-47012772 Glycine max
Glyma.02G290500 0.5kb upstream 0.5kb upstream 500 false Chr02: 47012273-47012772 Glycine max
Glyma.02G290500 0.5kb downstream 0.5kb downstream 5202 true Chr02: 47007071-47012272 Glycine max
Glyma.02G290500 0.5kb downstream 0.5kb downstream 500 false Chr02: 47007071-47007570 Glycine max
Glyma.02G290500 1.0kb upstream 1.0kb upstream 5702 true Chr02: 47007571-47013272 Glycine max
Glyma.02G290500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47012273-47013272 Glycine max
Glyma.02G290500 1.0kb downstream 1.0kb downstream 5702 true Chr02: 47006571-47012272 Glycine max
Glyma.02G290500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47006571-47007570 Glycine max
Glyma.02G290500 2.0kb upstream 2.0kb upstream 6702 true Chr02: 47007571-47014272 Glycine max
Glyma.02G290500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47012273-47014272 Glycine max
Glyma.02G290500 2.0kb downstream 2.0kb downstream 6702 true Chr02: 47005571-47012272 Glycine max
Glyma.02G290500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47005571-47007570 Glycine max
Glyma.02G290500 5.0kb upstream 5.0kb upstream 9702 true Chr02: 47007571-47017272 Glycine max
Glyma.02G290500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47012273-47017272 Glycine max
Glyma.02G290500 5.0kb downstream 5.0kb downstream 9702 true Chr02: 47002571-47012272 Glycine max
Glyma.02G290500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47002571-47007570 Glycine max
Glyma.02G290500 10.0kb upstream 10.0kb upstream 14702 true Chr02: 47007571-47022272 Glycine max
Glyma.02G290500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47012273-47022272 Glycine max
Glyma.02G290500 10.0kb downstream 10.0kb downstream 14702 true Chr02: 46997571-47012272 Glycine max
Glyma.02G290500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46997571-47007570 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305024 5265 Fabidae View MSA
124050163 5270 Rosid View MSA
123736626 5271 Pentapetalae View MSA
122787260 5272 Eudicot View MSA
122043969 5273 Angiosperm View MSA
121344902 5274 Embryophyte View MSA
123425397 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.74812 0.0 10.5728    
cufflinks 3.06781 0.0 8.85263    
cufflinks 1.58226 0.0 4.99712   Low
cufflinks 3.12073 0.0 8.97358    
cufflinks 6.32483 0.0 17.1077   High
cufflinks 2.7675 0.0 8.09639    
cufflinks 2.68254 0.0 7.89061    
cufflinks 3.53644 0.0 10.0211    
cufflinks 3.34664 0.0 9.55597    
cufflinks 2.12        
cufflinks 1.104       Low
cufflinks 2.036        
cufflinks 4.296       High
cufflinks 6.084       High
cufflinks 1.618        
cufflinks 2.033        
cufflinks 1.252       Low
cufflinks 2.018        
cufflinks 3.117        
cufflinks 1.388        
cufflinks 1.704        
cufflinks 1.719        
cufflinks 2.77        
cufflinks 1.339        
cufflinks 1.573        
cufflinks 2.166        

0 Strain