Gene : Glyma.02G289300 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24073:SF515 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MSD21 Genomic Order:  2893
Name:  ? Glyma.02G289300 Secondary Identifier:  ? PAC:30506467
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G289300 0.5kb upstream 0.5kb upstream 3892 true Chr02: 46913511-46917402 Glycine max
Glyma.02G289300 0.5kb upstream 0.5kb upstream 500 false Chr02: 46916903-46917402 Glycine max
Glyma.02G289300 0.5kb downstream 0.5kb downstream 3892 true Chr02: 46913011-46916902 Glycine max
Glyma.02G289300 0.5kb downstream 0.5kb downstream 500 false Chr02: 46913011-46913510 Glycine max
Glyma.02G289300 1.0kb upstream 1.0kb upstream 4392 true Chr02: 46913511-46917902 Glycine max
Glyma.02G289300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46916903-46917902 Glycine max
Glyma.02G289300 1.0kb downstream 1.0kb downstream 4392 true Chr02: 46912511-46916902 Glycine max
Glyma.02G289300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46912511-46913510 Glycine max
Glyma.02G289300 2.0kb upstream 2.0kb upstream 5392 true Chr02: 46913511-46918902 Glycine max
Glyma.02G289300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46916903-46918902 Glycine max
Glyma.02G289300 2.0kb downstream 2.0kb downstream 5392 true Chr02: 46911511-46916902 Glycine max
Glyma.02G289300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46911511-46913510 Glycine max
Glyma.02G289300 5.0kb upstream 5.0kb upstream 8392 true Chr02: 46913511-46921902 Glycine max
Glyma.02G289300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46916903-46921902 Glycine max
Glyma.02G289300 5.0kb downstream 5.0kb downstream 8392 true Chr02: 46908511-46916902 Glycine max
Glyma.02G289300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46908511-46913510 Glycine max
Glyma.02G289300 10.0kb upstream 10.0kb upstream 13392 true Chr02: 46913511-46926902 Glycine max
Glyma.02G289300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46916903-46926902 Glycine max
Glyma.02G289300 10.0kb downstream 10.0kb downstream 13392 true Chr02: 46903511-46916902 Glycine max
Glyma.02G289300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46903511-46913510 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029161 5273 Angiosperm View MSA
122304451 5265 Fabidae View MSA
124064316 5270 Rosid View MSA
123753329 5271 Pentapetalae View MSA
122789157 5272 Eudicot View MSA
121298542 5274 Embryophyte View MSA
123336508 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.19481 0.0 21.2841    
cufflinks 3.49002 0.0 15.8294    
cufflinks 9.72375 0.0 37.4007    
cufflinks 1.23414 0.0 6.62976   Low
cufflinks 5.82488 0.0 19.4222    
cufflinks 12.8731 0.0 48.5945   High
cufflinks 1.17305 0.0 6.257   Low
cufflinks 8.82167 0.0 34.7842    
cufflinks 6.3329 0.0 26.9557    
cufflinks 1.564        
cufflinks 9.536     High High
cufflinks 1.525        
cufflinks 1.889        
cufflinks 1.387        
cufflinks 4.719        
cufflinks 0.752        
cufflinks 3.227        
cufflinks 1.158        
cufflinks 0.857        
cufflinks 0.569       Low
cufflinks 6.532     High High
cufflinks 0.729        
cufflinks 0.487       Low
cufflinks 9.638     High High
cufflinks 0.798        
cufflinks 4.37        

0 Strain