Gene : Glyma.19G053400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12220 - 50S/60S RIBOSOMAL PROTEIN L16 Genomic Order:  534
Name:  ? Glyma.19G053400 Secondary Identifier:  ? PAC:30513569
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G053400 0.5kb upstream 0.5kb upstream 1526 true Chr19: 8719190-8720715 Glycine max
Glyma.19G053400 0.5kb upstream 0.5kb upstream 500 false Chr19: 8720216-8720715 Glycine max
Glyma.19G053400 0.5kb downstream 0.5kb downstream 1526 true Chr19: 8718690-8720215 Glycine max
Glyma.19G053400 0.5kb downstream 0.5kb downstream 500 false Chr19: 8718690-8719189 Glycine max
Glyma.19G053400 1.0kb upstream 1.0kb upstream 2026 true Chr19: 8719190-8721215 Glycine max
Glyma.19G053400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 8720216-8721215 Glycine max
Glyma.19G053400 1.0kb downstream 1.0kb downstream 2026 true Chr19: 8718190-8720215 Glycine max
Glyma.19G053400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 8718190-8719189 Glycine max
Glyma.19G053400 2.0kb upstream 2.0kb upstream 3026 true Chr19: 8719190-8722215 Glycine max
Glyma.19G053400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 8720216-8722215 Glycine max
Glyma.19G053400 2.0kb downstream 2.0kb downstream 3026 true Chr19: 8717190-8720215 Glycine max
Glyma.19G053400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 8717190-8719189 Glycine max
Glyma.19G053400 5.0kb upstream 5.0kb upstream 6026 true Chr19: 8719190-8725215 Glycine max
Glyma.19G053400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 8720216-8725215 Glycine max
Glyma.19G053400 5.0kb downstream 5.0kb downstream 6026 true Chr19: 8714190-8720215 Glycine max
Glyma.19G053400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 8714190-8719189 Glycine max
Glyma.19G053400 10.0kb upstream 10.0kb upstream 11026 true Chr19: 8719190-8730215 Glycine max
Glyma.19G053400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 8720216-8730215 Glycine max
Glyma.19G053400 10.0kb downstream 10.0kb downstream 11026 true Chr19: 8709190-8720215 Glycine max
Glyma.19G053400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 8709190-8719189 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122247691 5265 Fabidae Singleton cluster - no MSA
123991411 5270 Rosid Singleton cluster - no MSA
123566361 5271 Pentapetalae Singleton cluster - no MSA
122796002 5272 Eudicot View MSA
122041743 5273 Angiosperm View MSA
123429161 5275 Viridiplantae View MSA
121350825 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.225        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 0.047     Low  
cufflinks 0.172        
cufflinks 0.073        
cufflinks 0.376       High
cufflinks 0.099        
cufflinks 0.044     Low  
cufflinks 0.044     Low  
cufflinks 0.359       High
cufflinks 0.044     Low  
cufflinks 0.222        
cufflinks 0.252        
cufflinks 0.018     Low Low
cufflinks 0.23        
cufflinks 0.037     Low  

0 Strain