Gene : Glyma.02G300100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR35708:SF1 - GB Genomic Order:  3001
Name:  ? Glyma.02G300100 Secondary Identifier:  ? PAC:30506890
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G300100 0.5kb upstream 0.5kb upstream 2535 true Chr02: 47668288-47670822 Glycine max
Glyma.02G300100 0.5kb upstream 0.5kb upstream 500 false Chr02: 47668288-47668787 Glycine max
Glyma.02G300100 0.5kb downstream 0.5kb downstream 2535 true Chr02: 47668788-47671322 Glycine max
Glyma.02G300100 0.5kb downstream 0.5kb downstream 500 false Chr02: 47670823-47671322 Glycine max
Glyma.02G300100 1.0kb upstream 1.0kb upstream 3035 true Chr02: 47667788-47670822 Glycine max
Glyma.02G300100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47667788-47668787 Glycine max
Glyma.02G300100 1.0kb downstream 1.0kb downstream 3035 true Chr02: 47668788-47671822 Glycine max
Glyma.02G300100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47670823-47671822 Glycine max
Glyma.02G300100 2.0kb upstream 2.0kb upstream 4035 true Chr02: 47666788-47670822 Glycine max
Glyma.02G300100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47666788-47668787 Glycine max
Glyma.02G300100 2.0kb downstream 2.0kb downstream 4035 true Chr02: 47668788-47672822 Glycine max
Glyma.02G300100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47670823-47672822 Glycine max
Glyma.02G300100 5.0kb upstream 5.0kb upstream 7035 true Chr02: 47663788-47670822 Glycine max
Glyma.02G300100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47663788-47668787 Glycine max
Glyma.02G300100 5.0kb downstream 5.0kb downstream 7035 true Chr02: 47668788-47675822 Glycine max
Glyma.02G300100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47670823-47675822 Glycine max
Glyma.02G300100 10.0kb upstream 10.0kb upstream 12035 true Chr02: 47658788-47670822 Glycine max
Glyma.02G300100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47658788-47668787 Glycine max
Glyma.02G300100 10.0kb downstream 10.0kb downstream 12035 true Chr02: 47668788-47680822 Glycine max
Glyma.02G300100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47670823-47680822 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298594 5265 Fabidae View MSA
124070540 5270 Rosid View MSA
123748172 5271 Pentapetalae View MSA
122794330 5272 Eudicot View MSA
122044423 5273 Angiosperm View MSA
121310293 5274 Embryophyte View MSA
123347819 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0605973 0.0 0.245275 Low Low
cufflinks 1.13974 0.0 4.80487    
cufflinks 0.100391 0.0 0.396888 Low Low
cufflinks 0.10092 0.0 0.399044 Low Low
cufflinks 9.2689 0.0 33.8716   High
cufflinks 3.36078 0.0 13.749    
cufflinks 0.442639 0.0 2.18724    
cufflinks 1.09079 0.0 4.62252    
cufflinks 5.96389 0.0 23.7151   High
cufflinks 0.799        
cufflinks 0.108        
cufflinks 0.324        
cufflinks 6.011       High
cufflinks 11.915     High High
cufflinks 0.267        
cufflinks 0.144        
cufflinks 0.155        
cufflinks 0.501        
cufflinks 0.345        
cufflinks 0.048     Low Low
cufflinks 0.195        
cufflinks 0.126        
cufflinks 0.178        
cufflinks 0.136        
cufflinks 0.081     Low  
cufflinks 0.322        

0 Strain