Gene : Glyma.02G300200 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED Genomic Order:  3002
Name:  ? Glyma.02G300200 Secondary Identifier:  ? PAC:30506458
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G300200 0.5kb upstream 0.5kb upstream 1609 true Chr02: 47673284-47674892 Glycine max
Glyma.02G300200 0.5kb upstream 0.5kb upstream 500 false Chr02: 47673284-47673783 Glycine max
Glyma.02G300200 0.5kb downstream 0.5kb downstream 1609 true Chr02: 47673784-47675392 Glycine max
Glyma.02G300200 0.5kb downstream 0.5kb downstream 500 false Chr02: 47674893-47675392 Glycine max
Glyma.02G300200 1.0kb upstream 1.0kb upstream 2109 true Chr02: 47672784-47674892 Glycine max
Glyma.02G300200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47672784-47673783 Glycine max
Glyma.02G300200 1.0kb downstream 1.0kb downstream 2109 true Chr02: 47673784-47675892 Glycine max
Glyma.02G300200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47674893-47675892 Glycine max
Glyma.02G300200 2.0kb upstream 2.0kb upstream 3109 true Chr02: 47671784-47674892 Glycine max
Glyma.02G300200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47671784-47673783 Glycine max
Glyma.02G300200 2.0kb downstream 2.0kb downstream 3109 true Chr02: 47673784-47676892 Glycine max
Glyma.02G300200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47674893-47676892 Glycine max
Glyma.02G300200 5.0kb upstream 5.0kb upstream 6109 true Chr02: 47668784-47674892 Glycine max
Glyma.02G300200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47668784-47673783 Glycine max
Glyma.02G300200 5.0kb downstream 5.0kb downstream 6109 true Chr02: 47673784-47679892 Glycine max
Glyma.02G300200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47674893-47679892 Glycine max
Glyma.02G300200 10.0kb upstream 10.0kb upstream 11109 true Chr02: 47663784-47674892 Glycine max
Glyma.02G300200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47663784-47673783 Glycine max
Glyma.02G300200 10.0kb downstream 10.0kb downstream 11109 true Chr02: 47673784-47684892 Glycine max
Glyma.02G300200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47674893-47684892 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255391 5265 Fabidae View MSA
124072305 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9143 0.0 30.5121   High
cufflinks 9.10021 0.0 26.0745   High
cufflinks 5.02757 0.0 15.6078    
cufflinks 2.39326 0.0 8.17155    
cufflinks 2.6761 0.0 8.94551    
cufflinks 2.90742 0.0 9.67135    
cufflinks 4.34213 0.0 13.6781    
cufflinks 4.50184 0.0 14.1473    
cufflinks 2.00906 0.0 6.9719   Low
cufflinks 3.137        
cufflinks 0.24       Low
cufflinks 3.091        
cufflinks 0.875        
cufflinks 0.734        
cufflinks 0.285       Low
cufflinks 16.53     High High
cufflinks 0.636        
cufflinks 2.571        
cufflinks 6.017        
cufflinks 20.89     High High
cufflinks 0.29       Low
cufflinks 19.076     High High
cufflinks 11.749     High High
cufflinks 0.624        
cufflinks 17.894     High High
cufflinks 0.342       Low

0 Strain