Gene : Glyma.02G247700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN Genomic Order:  2477
Name:  ? Glyma.02G247700 Secondary Identifier:  ? PAC:30508412
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G247700 0.5kb upstream 0.5kb upstream 4790 true Chr02: 43532952-43537741 Glycine max
Glyma.02G247700 0.5kb upstream 0.5kb upstream 500 false Chr02: 43532952-43533451 Glycine max
Glyma.02G247700 0.5kb downstream 0.5kb downstream 4790 true Chr02: 43533452-43538241 Glycine max
Glyma.02G247700 0.5kb downstream 0.5kb downstream 500 false Chr02: 43537742-43538241 Glycine max
Glyma.02G247700 1.0kb upstream 1.0kb upstream 5290 true Chr02: 43532452-43537741 Glycine max
Glyma.02G247700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43532452-43533451 Glycine max
Glyma.02G247700 1.0kb downstream 1.0kb downstream 5290 true Chr02: 43533452-43538741 Glycine max
Glyma.02G247700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43537742-43538741 Glycine max
Glyma.02G247700 2.0kb upstream 2.0kb upstream 6290 true Chr02: 43531452-43537741 Glycine max
Glyma.02G247700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43531452-43533451 Glycine max
Glyma.02G247700 2.0kb downstream 2.0kb downstream 6290 true Chr02: 43533452-43539741 Glycine max
Glyma.02G247700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43537742-43539741 Glycine max
Glyma.02G247700 5.0kb upstream 5.0kb upstream 9290 true Chr02: 43528452-43537741 Glycine max
Glyma.02G247700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43528452-43533451 Glycine max
Glyma.02G247700 5.0kb downstream 5.0kb downstream 9290 true Chr02: 43533452-43542741 Glycine max
Glyma.02G247700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43537742-43542741 Glycine max
Glyma.02G247700 10.0kb upstream 10.0kb upstream 14290 true Chr02: 43523452-43537741 Glycine max
Glyma.02G247700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43523452-43533451 Glycine max
Glyma.02G247700 10.0kb downstream 10.0kb downstream 14290 true Chr02: 43533452-43547741 Glycine max
Glyma.02G247700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43537742-43547741 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305282 5265 Fabidae View MSA
124061509 5270 Rosid View MSA
123743961 5271 Pentapetalae View MSA
122788034 5272 Eudicot View MSA
122048523 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121344688 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.9006 0.0 53.1232   High
cufflinks 7.9086 0.0 21.8122    
cufflinks 3.95557 0.0 11.7635    
cufflinks 5.98412 0.0 16.9328    
cufflinks 4.9014 0.0 14.2101    
cufflinks 3.32657 0.0 10.1556   Low
cufflinks 8.51384 0.0 23.3493    
cufflinks 5.77709 0.0 16.4021    
cufflinks 5.01352 0.0 14.4834    
cufflinks 1.855        
cufflinks 1.261       Low
cufflinks 2.215        
cufflinks 2.021        
cufflinks 2.196        
cufflinks 1.714        
cufflinks 4.585       High
cufflinks 1.342       Low
cufflinks 2.132        
cufflinks 4.113       High
cufflinks 3.571        
cufflinks 1.28       Low
cufflinks 3.822       High
cufflinks 5.033       High
cufflinks 1.494        
cufflinks 4.316       High
cufflinks 1.25       Low

0 Strain