Gene : Glyma.02G256000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31412:SF5 - ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED Genomic Order:  2560
Name:  ? Glyma.02G256000 Secondary Identifier:  ? PAC:30508633
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G256000 0.5kb upstream 0.5kb upstream 5824 true Chr02: 44280501-44286324 Glycine max
Glyma.02G256000 0.5kb upstream 0.5kb upstream 500 false Chr02: 44280501-44281000 Glycine max
Glyma.02G256000 0.5kb downstream 0.5kb downstream 5824 true Chr02: 44281001-44286824 Glycine max
Glyma.02G256000 0.5kb downstream 0.5kb downstream 500 false Chr02: 44286325-44286824 Glycine max
Glyma.02G256000 1.0kb upstream 1.0kb upstream 6324 true Chr02: 44280001-44286324 Glycine max
Glyma.02G256000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44280001-44281000 Glycine max
Glyma.02G256000 1.0kb downstream 1.0kb downstream 6324 true Chr02: 44281001-44287324 Glycine max
Glyma.02G256000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44286325-44287324 Glycine max
Glyma.02G256000 2.0kb upstream 2.0kb upstream 7324 true Chr02: 44279001-44286324 Glycine max
Glyma.02G256000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44279001-44281000 Glycine max
Glyma.02G256000 2.0kb downstream 2.0kb downstream 7324 true Chr02: 44281001-44288324 Glycine max
Glyma.02G256000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44286325-44288324 Glycine max
Glyma.02G256000 5.0kb upstream 5.0kb upstream 10324 true Chr02: 44276001-44286324 Glycine max
Glyma.02G256000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44276001-44281000 Glycine max
Glyma.02G256000 5.0kb downstream 5.0kb downstream 10324 true Chr02: 44281001-44291324 Glycine max
Glyma.02G256000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44286325-44291324 Glycine max
Glyma.02G256000 10.0kb upstream 10.0kb upstream 15324 true Chr02: 44271001-44286324 Glycine max
Glyma.02G256000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44271001-44281000 Glycine max
Glyma.02G256000 10.0kb downstream 10.0kb downstream 15324 true Chr02: 44281001-44296324 Glycine max
Glyma.02G256000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44286325-44296324 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301078 5265 Fabidae View MSA
124061333 5270 Rosid View MSA
123739814 5271 Pentapetalae View MSA
122788407 5272 Eudicot View MSA
122044367 5273 Angiosperm View MSA
121345535 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.4112 0.0 51.8336   High
cufflinks 26.7426 0.0 72.1568 High High
cufflinks 6.18168 0.0 17.311    
cufflinks 8.29651 0.0 22.6881    
cufflinks 3.83427 0.0 11.4005    
cufflinks 2.19765 0.0 7.06534   Low
cufflinks 8.39148 0.0 22.9545    
cufflinks 7.94239 0.0 21.7799    
cufflinks 2.38231 0.0 7.5655   Low
cufflinks 4.504        
cufflinks 0.12       Low
cufflinks 3.885        
cufflinks 0.346        
cufflinks 0.482        
cufflinks 0.314        
cufflinks 17.942     High High
cufflinks 0.191        
cufflinks 5.558        
cufflinks 6.524        
cufflinks 31.498     High High
cufflinks 0.081       Low
cufflinks 23.463     High High
cufflinks 17.354     High High
cufflinks 0.115       Low
cufflinks 24.787     High High
cufflinks 0.112       Low

0 Strain