Gene : Glyma.02G254900 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG2975 - Translation initiation factor 3, subunit f (eIF-3f) Genomic Order:  2549
Name:  ? Glyma.02G254900 Secondary Identifier:  ? PAC:30510488
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G254900 0.5kb upstream 0.5kb upstream 3812 true Chr02: 44198284-44202095 Glycine max
Glyma.02G254900 0.5kb upstream 0.5kb upstream 500 false Chr02: 44201596-44202095 Glycine max
Glyma.02G254900 0.5kb downstream 0.5kb downstream 3812 true Chr02: 44197784-44201595 Glycine max
Glyma.02G254900 0.5kb downstream 0.5kb downstream 500 false Chr02: 44197784-44198283 Glycine max
Glyma.02G254900 1.0kb upstream 1.0kb upstream 4312 true Chr02: 44198284-44202595 Glycine max
Glyma.02G254900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44201596-44202595 Glycine max
Glyma.02G254900 1.0kb downstream 1.0kb downstream 4312 true Chr02: 44197284-44201595 Glycine max
Glyma.02G254900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44197284-44198283 Glycine max
Glyma.02G254900 2.0kb upstream 2.0kb upstream 5312 true Chr02: 44198284-44203595 Glycine max
Glyma.02G254900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44201596-44203595 Glycine max
Glyma.02G254900 2.0kb downstream 2.0kb downstream 5312 true Chr02: 44196284-44201595 Glycine max
Glyma.02G254900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44196284-44198283 Glycine max
Glyma.02G254900 5.0kb upstream 5.0kb upstream 8312 true Chr02: 44198284-44206595 Glycine max
Glyma.02G254900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44201596-44206595 Glycine max
Glyma.02G254900 5.0kb downstream 5.0kb downstream 8312 true Chr02: 44193284-44201595 Glycine max
Glyma.02G254900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44193284-44198283 Glycine max
Glyma.02G254900 10.0kb upstream 10.0kb upstream 13312 true Chr02: 44198284-44211595 Glycine max
Glyma.02G254900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44201596-44211595 Glycine max
Glyma.02G254900 10.0kb downstream 10.0kb downstream 13312 true Chr02: 44188284-44201595 Glycine max
Glyma.02G254900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44188284-44198283 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615318 5273 Angiosperm View MSA
122250138 5265 Fabidae View MSA
123993433 5270 Rosid View MSA
123568210 5271 Pentapetalae View MSA
122602957 5272 Eudicot View MSA
121349154 5274 Embryophyte View MSA
123428358 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.599286 0.0 3.02374    
cufflinks 0.823949 0.0 4.03128    
cufflinks 0.0473511 0.0 0.2142 Low Low
cufflinks 0.261264 0.0 2.00953    
cufflinks 2.10572 0.0 9.04512    
cufflinks 2.84048 0.0 11.2704   High
cufflinks 0.0473262 0.0 0.211463 Low Low
cufflinks 0.0496893 0.0 0.218905 Low Low
cufflinks 2.94189 0.0 11.6105   High
cufflinks 0.037     Low Low
cufflinks 0.092        
cufflinks 0.085     Low  
cufflinks 1.285       High
cufflinks 1.19       High
cufflinks 0.179        
cufflinks 0.219        
cufflinks 0.186        
cufflinks 0.134        
cufflinks 0.233        
cufflinks 0.204        
cufflinks 0.147        
cufflinks 0.192        
cufflinks 0.28        
cufflinks 0.079       Low
cufflinks 0.252        
cufflinks 0.242        

0 Strain