Gene : Glyma.02G224900 G. max Wm82.a2.v1
Defline:  (1 of 13) PTHR24078:SF279 - DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  2249
Name:  ? Glyma.02G224900 Secondary Identifier:  ? PAC:30508531
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G224900 0.5kb upstream 0.5kb upstream 3182 true Chr02: 41236844-41240025 Glycine max
Glyma.02G224900 0.5kb upstream 0.5kb upstream 500 false Chr02: 41236844-41237343 Glycine max
Glyma.02G224900 0.5kb downstream 0.5kb downstream 3182 true Chr02: 41237344-41240525 Glycine max
Glyma.02G224900 0.5kb downstream 0.5kb downstream 500 false Chr02: 41240026-41240525 Glycine max
Glyma.02G224900 1.0kb upstream 1.0kb upstream 3682 true Chr02: 41236344-41240025 Glycine max
Glyma.02G224900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41236344-41237343 Glycine max
Glyma.02G224900 1.0kb downstream 1.0kb downstream 3682 true Chr02: 41237344-41241025 Glycine max
Glyma.02G224900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41240026-41241025 Glycine max
Glyma.02G224900 2.0kb upstream 2.0kb upstream 4682 true Chr02: 41235344-41240025 Glycine max
Glyma.02G224900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41235344-41237343 Glycine max
Glyma.02G224900 2.0kb downstream 2.0kb downstream 4682 true Chr02: 41237344-41242025 Glycine max
Glyma.02G224900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41240026-41242025 Glycine max
Glyma.02G224900 5.0kb upstream 5.0kb upstream 7682 true Chr02: 41232344-41240025 Glycine max
Glyma.02G224900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41232344-41237343 Glycine max
Glyma.02G224900 5.0kb downstream 5.0kb downstream 7682 true Chr02: 41237344-41245025 Glycine max
Glyma.02G224900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41240026-41245025 Glycine max
Glyma.02G224900 10.0kb upstream 10.0kb upstream 12682 true Chr02: 41227344-41240025 Glycine max
Glyma.02G224900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41227344-41237343 Glycine max
Glyma.02G224900 10.0kb downstream 10.0kb downstream 12682 true Chr02: 41237344-41250025 Glycine max
Glyma.02G224900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41240026-41250025 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254306 5265 Fabidae View MSA
124070601 5270 Rosid View MSA
123748936 5271 Pentapetalae View MSA
122794649 5272 Eudicot View MSA
122047094 5273 Angiosperm View MSA
121310689 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.97486 0.0 14.2016    
cufflinks 5.07654 0.0 14.4095    
cufflinks 2.6903 0.0 8.25738   Low
cufflinks 9.68365 0.0 26.1103    
cufflinks 5.21055 0.0 14.8164    
cufflinks 14.4537 0.0 38.5743   High
cufflinks 2.06418 0.0 6.6541   Low
cufflinks 17.1197 0.0 45.7043   High
cufflinks 3.52213 0.0 10.4743    
cufflinks 7.46        
cufflinks 0.415       Low
cufflinks 4.743        
cufflinks 1.974        
cufflinks 0.874        
cufflinks 0.1       Low
cufflinks 13.552     High High
cufflinks 0.388       Low
cufflinks 8.812     High  
cufflinks 4.038        
cufflinks 15.869     High High
cufflinks 0.676        
cufflinks 14.523     High High
cufflinks 5.95        
cufflinks 0.369       Low
cufflinks 12.33     High High
cufflinks 0.945        

0 Strain