Gene : Glyma.02G231600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11709:SF68 - LACCASE-13-RELATED Genomic Order:  2316
Name:  ? Glyma.02G231600 Secondary Identifier:  ? PAC:30508331
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G231600 0.5kb upstream 0.5kb upstream 3474 true Chr02: 41882853-41886326 Glycine max
Glyma.02G231600 0.5kb upstream 0.5kb upstream 500 false Chr02: 41885827-41886326 Glycine max
Glyma.02G231600 0.5kb downstream 0.5kb downstream 3474 true Chr02: 41882353-41885826 Glycine max
Glyma.02G231600 0.5kb downstream 0.5kb downstream 500 false Chr02: 41882353-41882852 Glycine max
Glyma.02G231600 1.0kb upstream 1.0kb upstream 3974 true Chr02: 41882853-41886826 Glycine max
Glyma.02G231600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41885827-41886826 Glycine max
Glyma.02G231600 1.0kb downstream 1.0kb downstream 3974 true Chr02: 41881853-41885826 Glycine max
Glyma.02G231600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41881853-41882852 Glycine max
Glyma.02G231600 2.0kb upstream 2.0kb upstream 4974 true Chr02: 41882853-41887826 Glycine max
Glyma.02G231600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41885827-41887826 Glycine max
Glyma.02G231600 2.0kb downstream 2.0kb downstream 4974 true Chr02: 41880853-41885826 Glycine max
Glyma.02G231600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41880853-41882852 Glycine max
Glyma.02G231600 5.0kb upstream 5.0kb upstream 7974 true Chr02: 41882853-41890826 Glycine max
Glyma.02G231600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41885827-41890826 Glycine max
Glyma.02G231600 5.0kb downstream 5.0kb downstream 7974 true Chr02: 41877853-41885826 Glycine max
Glyma.02G231600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41877853-41882852 Glycine max
Glyma.02G231600 10.0kb upstream 10.0kb upstream 12974 true Chr02: 41882853-41895826 Glycine max
Glyma.02G231600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41885827-41895826 Glycine max
Glyma.02G231600 10.0kb downstream 10.0kb downstream 12974 true Chr02: 41872853-41885826 Glycine max
Glyma.02G231600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41872853-41882852 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123752293 5271 Pentapetalae View MSA
122312602 5265 Fabidae View MSA
124075203 5270 Rosid View MSA
122774464 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0222983 0.0 0.095024 Low Low
cufflinks 0.163822 0.0 0.634432 Low  
cufflinks 0.338818 0.0 1.27008    
cufflinks 0.0784825 0.0 0.312276 Low  
cufflinks 13.1035 0.0 35.0317   High
cufflinks 3.42752 0.0 10.2876    
cufflinks 0.152844 0.0 0.592909 Low  
cufflinks 0.388362 0.0 1.44472    
cufflinks 18.7042 0.0 49.9607   High
cufflinks 0.041     Low  
cufflinks 1.419        
cufflinks 0.072     Low  
cufflinks 16.921     High High
cufflinks 1.38        
cufflinks 0.359        
cufflinks 0.007     Low Low
cufflinks 8.577     High High
cufflinks 0.017     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.866       High
cufflinks 0.004     Low Low
cufflinks 0.022     Low  
cufflinks 1.697        
cufflinks 0.005     Low Low
cufflinks 4.744       High

0 Strain