Gene : Glyma.02G240900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31867:SF3 - EXPANSIN-A13 Genomic Order:  2409
Name:  ? Glyma.02G240900 Secondary Identifier:  ? PAC:30509141
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G240900 0.5kb upstream 0.5kb upstream 2889 true Chr02: 42923065-42925953 Glycine max
Glyma.02G240900 0.5kb upstream 0.5kb upstream 500 false Chr02: 42925454-42925953 Glycine max
Glyma.02G240900 0.5kb downstream 0.5kb downstream 2889 true Chr02: 42922565-42925453 Glycine max
Glyma.02G240900 0.5kb downstream 0.5kb downstream 500 false Chr02: 42922565-42923064 Glycine max
Glyma.02G240900 1.0kb upstream 1.0kb upstream 3389 true Chr02: 42923065-42926453 Glycine max
Glyma.02G240900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42925454-42926453 Glycine max
Glyma.02G240900 1.0kb downstream 1.0kb downstream 3389 true Chr02: 42922065-42925453 Glycine max
Glyma.02G240900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42922065-42923064 Glycine max
Glyma.02G240900 2.0kb upstream 2.0kb upstream 4389 true Chr02: 42923065-42927453 Glycine max
Glyma.02G240900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42925454-42927453 Glycine max
Glyma.02G240900 2.0kb downstream 2.0kb downstream 4389 true Chr02: 42921065-42925453 Glycine max
Glyma.02G240900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42921065-42923064 Glycine max
Glyma.02G240900 5.0kb upstream 5.0kb upstream 7389 true Chr02: 42923065-42930453 Glycine max
Glyma.02G240900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42925454-42930453 Glycine max
Glyma.02G240900 5.0kb downstream 5.0kb downstream 7389 true Chr02: 42918065-42925453 Glycine max
Glyma.02G240900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42918065-42923064 Glycine max
Glyma.02G240900 10.0kb upstream 10.0kb upstream 12389 true Chr02: 42923065-42935453 Glycine max
Glyma.02G240900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42925454-42935453 Glycine max
Glyma.02G240900 10.0kb downstream 10.0kb downstream 12389 true Chr02: 42913065-42925453 Glycine max
Glyma.02G240900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42913065-42923064 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304401 5265 Fabidae View MSA
124061615 5270 Rosid View MSA
123746743 5271 Pentapetalae View MSA
122791118 5272 Eudicot View MSA
122045799 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121310504 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.453487 0.0 1.7057   Low
cufflinks 5.53933 0.0 16.4459    
cufflinks 1.25885 0.0 4.48521   Low
cufflinks 8.83631 0.0 24.7741    
cufflinks 6.32836 0.0 18.2936    
cufflinks 2.84267 0.0 9.21066    
cufflinks 5.81851 0.0 17.0425    
cufflinks 8.31824 0.0 23.46    
cufflinks 4.25716 0.0 13.0483    
cufflinks 3.374       High
cufflinks 0.123       Low
cufflinks 0.994        
cufflinks 1.962        
cufflinks 3.146       High
cufflinks 0.172       Low
cufflinks 1.0        
cufflinks 0.276        
cufflinks 1.613        
cufflinks 2.155        
cufflinks 0.835        
cufflinks 0.224       Low
cufflinks 0.9        
cufflinks 1.489        
cufflinks 0.095       Low
cufflinks 0.824        
cufflinks 0.325        

0 Strain