Gene : Glyma.03G044200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23324:SF57 - PATELLIN-6 Genomic Order:  442
Name:  ? Glyma.03G044200 Secondary Identifier:  ? PAC:30516881
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G044200 0.5kb upstream 0.5kb upstream 3943 true Chr03: 5586338-5590280 Glycine max
Glyma.03G044200 0.5kb upstream 0.5kb upstream 500 false Chr03: 5589781-5590280 Glycine max
Glyma.03G044200 0.5kb downstream 0.5kb downstream 3943 true Chr03: 5585838-5589780 Glycine max
Glyma.03G044200 0.5kb downstream 0.5kb downstream 500 false Chr03: 5585838-5586337 Glycine max
Glyma.03G044200 1.0kb upstream 1.0kb upstream 4443 true Chr03: 5586338-5590780 Glycine max
Glyma.03G044200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5589781-5590780 Glycine max
Glyma.03G044200 1.0kb downstream 1.0kb downstream 4443 true Chr03: 5585338-5589780 Glycine max
Glyma.03G044200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5585338-5586337 Glycine max
Glyma.03G044200 2.0kb upstream 2.0kb upstream 5443 true Chr03: 5586338-5591780 Glycine max
Glyma.03G044200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5589781-5591780 Glycine max
Glyma.03G044200 2.0kb downstream 2.0kb downstream 5443 true Chr03: 5584338-5589780 Glycine max
Glyma.03G044200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5584338-5586337 Glycine max
Glyma.03G044200 5.0kb upstream 5.0kb upstream 8443 true Chr03: 5586338-5594780 Glycine max
Glyma.03G044200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5589781-5594780 Glycine max
Glyma.03G044200 5.0kb downstream 5.0kb downstream 8443 true Chr03: 5581338-5589780 Glycine max
Glyma.03G044200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5581338-5586337 Glycine max
Glyma.03G044200 10.0kb upstream 10.0kb upstream 13443 true Chr03: 5586338-5599780 Glycine max
Glyma.03G044200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5589781-5599780 Glycine max
Glyma.03G044200 10.0kb downstream 10.0kb downstream 13443 true Chr03: 5576338-5589780 Glycine max
Glyma.03G044200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5576338-5586337 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306168 5265 Fabidae View MSA
124061796 5270 Rosid View MSA
123743132 5271 Pentapetalae View MSA
122791102 5272 Eudicot View MSA
122041673 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121350368 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.75037 0.0 5.55572   Low
cufflinks 27.7018 0.0 76.6 High High
cufflinks 6.74287 0.0 18.2843    
cufflinks 15.928 0.0 42.6766    
cufflinks 11.7304 0.0 31.2987    
cufflinks 5.56755 0.0 15.3231    
cufflinks 13.4015 0.0 35.7732    
cufflinks 27.3511 0.0 75.6795 High High
cufflinks 9.94328 0.0 26.584    
cufflinks 14.221     High High
cufflinks 1.657       Low
cufflinks 12.228     High  
cufflinks 8.806     High  
cufflinks 11.414     High  
cufflinks 0.502       Low
cufflinks 5.78        
cufflinks 2.955        
cufflinks 10.265     High  
cufflinks 21.469     High High
cufflinks 3.927        
cufflinks 2.334        
cufflinks 5.649        
cufflinks 9.912     High  
cufflinks 2.109        
cufflinks 4.351        
cufflinks 1.986        

0 Strain