Gene : Glyma.19G082500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13904 - PRE-MRNA SPLICING FACTOR PRP31 Genomic Order:  825
Name:  ? Glyma.19G082500 Secondary Identifier:  ? PAC:30511640
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G082500 0.5kb upstream 0.5kb upstream 7937 true Chr19: 29914706-29922642 Glycine max
Glyma.19G082500 0.5kb upstream 0.5kb upstream 500 false Chr19: 29914706-29915205 Glycine max
Glyma.19G082500 0.5kb downstream 0.5kb downstream 7937 true Chr19: 29915206-29923142 Glycine max
Glyma.19G082500 0.5kb downstream 0.5kb downstream 500 false Chr19: 29922643-29923142 Glycine max
Glyma.19G082500 1.0kb upstream 1.0kb upstream 8437 true Chr19: 29914206-29922642 Glycine max
Glyma.19G082500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 29914206-29915205 Glycine max
Glyma.19G082500 1.0kb downstream 1.0kb downstream 8437 true Chr19: 29915206-29923642 Glycine max
Glyma.19G082500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 29922643-29923642 Glycine max
Glyma.19G082500 2.0kb upstream 2.0kb upstream 9437 true Chr19: 29913206-29922642 Glycine max
Glyma.19G082500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 29913206-29915205 Glycine max
Glyma.19G082500 2.0kb downstream 2.0kb downstream 9437 true Chr19: 29915206-29924642 Glycine max
Glyma.19G082500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 29922643-29924642 Glycine max
Glyma.19G082500 5.0kb upstream 5.0kb upstream 12437 true Chr19: 29910206-29922642 Glycine max
Glyma.19G082500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 29910206-29915205 Glycine max
Glyma.19G082500 5.0kb downstream 5.0kb downstream 12437 true Chr19: 29915206-29927642 Glycine max
Glyma.19G082500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 29922643-29927642 Glycine max
Glyma.19G082500 10.0kb upstream 10.0kb upstream 17437 true Chr19: 29905206-29922642 Glycine max
Glyma.19G082500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 29905206-29915205 Glycine max
Glyma.19G082500 10.0kb downstream 10.0kb downstream 17437 true Chr19: 29915206-29932642 Glycine max
Glyma.19G082500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 29922643-29932642 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309617 5265 Fabidae View MSA
124062587 5270 Rosid View MSA
123753460 5271 Pentapetalae View MSA
122792370 5272 Eudicot View MSA
122045972 5273 Angiosperm View MSA
123428992 5275 Viridiplantae View MSA
121345979 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.73668 0.0 26.1239    
cufflinks 11.682 0.0 31.2024    
cufflinks 9.40136 0.0 25.2468    
cufflinks 10.6762 0.0 28.5658    
cufflinks 12.0266 0.0 32.1111    
cufflinks 10.3031 0.0 27.5959    
cufflinks 21.1192 0.0 56.8867   High
cufflinks 11.0208 0.0 29.4613    
cufflinks 11.2595 0.0 30.0929    
cufflinks 2.577       Low
cufflinks 3.26        
cufflinks 2.887        
cufflinks 4.285        
cufflinks 4.699       High
cufflinks 3.316        
cufflinks 4.385        
cufflinks 2.347       Low
cufflinks 3.038        
cufflinks 3.968        
cufflinks 4.899       High
cufflinks 3.287        
cufflinks 4.484       High
cufflinks 3.819        
cufflinks 3.68        
cufflinks 4.255        
cufflinks 2.733       Low

0 Strain