Gene : Glyma.03G063200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR34550:SF1 - 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC Genomic Order:  632
Name:  ? Glyma.03G063200 Secondary Identifier:  ? PAC:30518433
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G063200 0.5kb upstream 0.5kb upstream 1507 true Chr03: 9896479-9897985 Glycine max
Glyma.03G063200 0.5kb upstream 0.5kb upstream 500 false Chr03: 9897486-9897985 Glycine max
Glyma.03G063200 0.5kb downstream 0.5kb downstream 1507 true Chr03: 9895979-9897485 Glycine max
Glyma.03G063200 0.5kb downstream 0.5kb downstream 500 false Chr03: 9895979-9896478 Glycine max
Glyma.03G063200 1.0kb upstream 1.0kb upstream 2007 true Chr03: 9896479-9898485 Glycine max
Glyma.03G063200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 9897486-9898485 Glycine max
Glyma.03G063200 1.0kb downstream 1.0kb downstream 2007 true Chr03: 9895479-9897485 Glycine max
Glyma.03G063200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 9895479-9896478 Glycine max
Glyma.03G063200 2.0kb upstream 2.0kb upstream 3007 true Chr03: 9896479-9899485 Glycine max
Glyma.03G063200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 9897486-9899485 Glycine max
Glyma.03G063200 2.0kb downstream 2.0kb downstream 3007 true Chr03: 9894479-9897485 Glycine max
Glyma.03G063200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 9894479-9896478 Glycine max
Glyma.03G063200 5.0kb upstream 5.0kb upstream 6007 true Chr03: 9896479-9902485 Glycine max
Glyma.03G063200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 9897486-9902485 Glycine max
Glyma.03G063200 5.0kb downstream 5.0kb downstream 6007 true Chr03: 9891479-9897485 Glycine max
Glyma.03G063200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 9891479-9896478 Glycine max
Glyma.03G063200 10.0kb upstream 10.0kb upstream 11007 true Chr03: 9896479-9907485 Glycine max
Glyma.03G063200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 9897486-9907485 Glycine max
Glyma.03G063200 10.0kb downstream 10.0kb downstream 11007 true Chr03: 9886479-9897485 Glycine max
Glyma.03G063200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 9886479-9896478 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307820 5265 Fabidae View MSA
124067793 5270 Rosid View MSA
123752888 5271 Pentapetalae View MSA
122792825 5272 Eudicot View MSA
122046754 5273 Angiosperm View MSA
121345882 5274 Embryophyte View MSA
123380282 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 80.058 0.0 215.499 High High
cufflinks 75.7048 0.0 203.47 High High
cufflinks 24.5488 0.0 67.6586 High  
cufflinks 34.1744 0.0 92.0564 High  
cufflinks 25.6351 0.0 70.1728 High  
cufflinks 17.2194 0.0 48.9432   Low
cufflinks 29.5972 0.0 80.2615 High  
cufflinks 35.5923 0.0 95.5751 High  
cufflinks 19.2021 0.0 53.8227    
cufflinks 30.467     High  
cufflinks 5.655     High Low
cufflinks 20.544     High  
cufflinks 13.474     High  
cufflinks 9.831     High  
cufflinks 12.315     High  
cufflinks 165.101     High High
cufflinks 4.824       Low
cufflinks 22.31     High  
cufflinks 35.223     High  
cufflinks 160.665     High High
cufflinks 6.541     High  
cufflinks 138.921     High High
cufflinks 107.39     High High
cufflinks 5.176       Low
cufflinks 161.08     High High
cufflinks 5.191       Low

0 Strain