Gene : Glyma.03G013600 G. max Wm82.a2.v1
Defline:  (1 of 2) PF02137 - Adenosine-deaminase (editase) domain (A_deamin) Genomic Order:  136
Name:  ? Glyma.03G013600 Secondary Identifier:  ? PAC:30518074
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G013600 0.5kb upstream 0.5kb upstream 10900 true Chr03: 1379493-1390392 Glycine max
Glyma.03G013600 0.5kb upstream 0.5kb upstream 500 false Chr03: 1379493-1379992 Glycine max
Glyma.03G013600 0.5kb downstream 0.5kb downstream 10900 true Chr03: 1379993-1390892 Glycine max
Glyma.03G013600 0.5kb downstream 0.5kb downstream 500 false Chr03: 1390393-1390892 Glycine max
Glyma.03G013600 1.0kb upstream 1.0kb upstream 11400 true Chr03: 1378993-1390392 Glycine max
Glyma.03G013600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1378993-1379992 Glycine max
Glyma.03G013600 1.0kb downstream 1.0kb downstream 11400 true Chr03: 1379993-1391392 Glycine max
Glyma.03G013600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1390393-1391392 Glycine max
Glyma.03G013600 2.0kb upstream 2.0kb upstream 12400 true Chr03: 1377993-1390392 Glycine max
Glyma.03G013600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1377993-1379992 Glycine max
Glyma.03G013600 2.0kb downstream 2.0kb downstream 12400 true Chr03: 1379993-1392392 Glycine max
Glyma.03G013600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1390393-1392392 Glycine max
Glyma.03G013600 5.0kb upstream 5.0kb upstream 15400 true Chr03: 1374993-1390392 Glycine max
Glyma.03G013600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1374993-1379992 Glycine max
Glyma.03G013600 5.0kb downstream 5.0kb downstream 15400 true Chr03: 1379993-1395392 Glycine max
Glyma.03G013600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1390393-1395392 Glycine max
Glyma.03G013600 10.0kb upstream 10.0kb upstream 20400 true Chr03: 1369993-1390392 Glycine max
Glyma.03G013600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1369993-1379992 Glycine max
Glyma.03G013600 10.0kb downstream 10.0kb downstream 20400 true Chr03: 1379993-1400392 Glycine max
Glyma.03G013600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1390393-1400392 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306991 5265 Fabidae View MSA
124068273 5270 Rosid View MSA
123741419 5271 Pentapetalae View MSA
122786096 5272 Eudicot View MSA
122043164 5273 Angiosperm View MSA
121346845 5274 Embryophyte View MSA
123424595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.849969 0.0 3.12815    
cufflinks 1.59082 0.0 5.61416    
cufflinks 0.883758 0.0 3.23876    
cufflinks 1.00294 0.0 3.65093    
cufflinks 1.08385 0.0 3.93012    
cufflinks 0.249602 0.0 0.971102 Low Low
cufflinks 2.62028 0.0 8.79794   High
cufflinks 0.853981 0.0 3.13669    
cufflinks 0.283929 0.0 1.09822   Low
cufflinks 0.069     Low  
cufflinks 0.035     Low Low
cufflinks 0.308        
cufflinks 0.054     Low  
cufflinks 0.056     Low  
cufflinks 0.045     Low  
cufflinks 0.321        
cufflinks 0.054     Low  
cufflinks 0.375       High
cufflinks 0.22        
cufflinks 0.332       High
cufflinks 0.034     Low Low
cufflinks 0.37       High
cufflinks 0.322       High
cufflinks 0.025     Low Low
cufflinks 0.355       High
cufflinks 0.047     Low  

0 Strain