Gene : Glyma.03G018600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14986 - RURM1 PROTEIN Genomic Order:  186
Name:  ? Glyma.03G018600 Secondary Identifier:  ? PAC:30519135
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G018600 0.5kb upstream 0.5kb upstream 3863 true Chr03: 1859210-1863072 Glycine max
Glyma.03G018600 0.5kb upstream 0.5kb upstream 500 false Chr03: 1862573-1863072 Glycine max
Glyma.03G018600 0.5kb downstream 0.5kb downstream 3863 true Chr03: 1858710-1862572 Glycine max
Glyma.03G018600 0.5kb downstream 0.5kb downstream 500 false Chr03: 1858710-1859209 Glycine max
Glyma.03G018600 1.0kb upstream 1.0kb upstream 4363 true Chr03: 1859210-1863572 Glycine max
Glyma.03G018600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1862573-1863572 Glycine max
Glyma.03G018600 1.0kb downstream 1.0kb downstream 4363 true Chr03: 1858210-1862572 Glycine max
Glyma.03G018600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1858210-1859209 Glycine max
Glyma.03G018600 2.0kb upstream 2.0kb upstream 5363 true Chr03: 1859210-1864572 Glycine max
Glyma.03G018600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1862573-1864572 Glycine max
Glyma.03G018600 2.0kb downstream 2.0kb downstream 5363 true Chr03: 1857210-1862572 Glycine max
Glyma.03G018600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1857210-1859209 Glycine max
Glyma.03G018600 5.0kb upstream 5.0kb upstream 8363 true Chr03: 1859210-1867572 Glycine max
Glyma.03G018600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1862573-1867572 Glycine max
Glyma.03G018600 5.0kb downstream 5.0kb downstream 8363 true Chr03: 1854210-1862572 Glycine max
Glyma.03G018600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1854210-1859209 Glycine max
Glyma.03G018600 10.0kb upstream 10.0kb upstream 13363 true Chr03: 1859210-1872572 Glycine max
Glyma.03G018600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1862573-1872572 Glycine max
Glyma.03G018600 10.0kb downstream 10.0kb downstream 13363 true Chr03: 1849210-1862572 Glycine max
Glyma.03G018600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1849210-1859209 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300531 5265 Fabidae View MSA
124062744 5270 Rosid View MSA
123740822 5271 Pentapetalae View MSA
122787578 5272 Eudicot View MSA
122042702 5273 Angiosperm View MSA
121349915 5274 Embryophyte View MSA
123424285 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.498142 0.0 2.06188    
cufflinks 0.483007 0.0 2.00294    
cufflinks 0.761734 0.0 3.0701    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.647469 0.0 2.63025    
cufflinks 0.301097 0.0 1.29036   Low
cufflinks 0.679866 0.0 2.75782    
cufflinks 0.461102 0.0 1.90953    
cufflinks 0.785602 0.0 3.16823   High
cufflinks 0.184       Low
cufflinks 0.535        
cufflinks 1.078       High
cufflinks 0.371        
cufflinks 0.732        
cufflinks 0.973       High
cufflinks 0.539        
cufflinks 0.19       Low
cufflinks 1.211       High
cufflinks 0.649        
cufflinks 0.64        
cufflinks 0.19       Low
cufflinks 0.649        
cufflinks 0.577        
cufflinks 0.438        
cufflinks 0.709        
cufflinks 0.176       Low

0 Strain