Gene : Glyma.03G022200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33601:SF1 - LITTLE ZIPPER 1 PROTEIN-RELATED Genomic Order:  222
Name:  ? Glyma.03G022200 Secondary Identifier:  ? PAC:30519180
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G022200 0.5kb upstream 0.5kb upstream 2061 true Chr03: 2325704-2327764 Glycine max
Glyma.03G022200 0.5kb upstream 0.5kb upstream 500 false Chr03: 2325704-2326203 Glycine max
Glyma.03G022200 0.5kb downstream 0.5kb downstream 2061 true Chr03: 2326204-2328264 Glycine max
Glyma.03G022200 0.5kb downstream 0.5kb downstream 500 false Chr03: 2327765-2328264 Glycine max
Glyma.03G022200 1.0kb upstream 1.0kb upstream 2561 true Chr03: 2325204-2327764 Glycine max
Glyma.03G022200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2325204-2326203 Glycine max
Glyma.03G022200 1.0kb downstream 1.0kb downstream 2561 true Chr03: 2326204-2328764 Glycine max
Glyma.03G022200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2327765-2328764 Glycine max
Glyma.03G022200 2.0kb upstream 2.0kb upstream 3561 true Chr03: 2324204-2327764 Glycine max
Glyma.03G022200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2324204-2326203 Glycine max
Glyma.03G022200 2.0kb downstream 2.0kb downstream 3561 true Chr03: 2326204-2329764 Glycine max
Glyma.03G022200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2327765-2329764 Glycine max
Glyma.03G022200 5.0kb upstream 5.0kb upstream 6561 true Chr03: 2321204-2327764 Glycine max
Glyma.03G022200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2321204-2326203 Glycine max
Glyma.03G022200 5.0kb downstream 5.0kb downstream 6561 true Chr03: 2326204-2332764 Glycine max
Glyma.03G022200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2327765-2332764 Glycine max
Glyma.03G022200 10.0kb upstream 10.0kb upstream 11561 true Chr03: 2316204-2327764 Glycine max
Glyma.03G022200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2316204-2326203 Glycine max
Glyma.03G022200 10.0kb downstream 10.0kb downstream 11561 true Chr03: 2326204-2337764 Glycine max
Glyma.03G022200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2327765-2337764 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041483 5273 Angiosperm View MSA
122254691 5265 Fabidae View MSA
124070399 5270 Rosid View MSA
123743735 5271 Pentapetalae View MSA
122787347 5272 Eudicot View MSA
121309855 5274 Embryophyte View MSA
123347500 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.758345 0.0 2.84447    
cufflinks 7.25072 0.0 21.9119    
cufflinks 6.27828 0.0 19.2965    
cufflinks 0.368537 0.0 1.42444   Low
cufflinks 2.59515 0.0 9.00663    
cufflinks 2.37578 0.0 8.29567    
cufflinks 1.13475 0.0 4.17296    
cufflinks 33.6537 0.0 89.7976 High High
cufflinks 2.45931 0.0 8.5496    
cufflinks 18.468     High High
cufflinks 0.882        
cufflinks 2.971        
cufflinks 0.226       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.086       Low
cufflinks 1.934        
cufflinks 2.226        
cufflinks 4.331        
cufflinks 4.217        
cufflinks 1.881        
cufflinks 1.447        
cufflinks 2.169        
cufflinks 1.377        
cufflinks 1.359        
cufflinks 2.283        
cufflinks 0.283       Low

0 Strain