Gene : Glyma.03G028800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10804:SF13 - METHIONINE AMINOPEPTIDASE 1 Genomic Order:  288
Name:  ? Glyma.03G028800 Secondary Identifier:  ? PAC:30518112
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G028800 0.5kb upstream 0.5kb upstream 7957 true Chr03: 3132472-3140428 Glycine max
Glyma.03G028800 0.5kb upstream 0.5kb upstream 500 false Chr03: 3139929-3140428 Glycine max
Glyma.03G028800 0.5kb downstream 0.5kb downstream 7957 true Chr03: 3131972-3139928 Glycine max
Glyma.03G028800 0.5kb downstream 0.5kb downstream 500 false Chr03: 3131972-3132471 Glycine max
Glyma.03G028800 1.0kb upstream 1.0kb upstream 8457 true Chr03: 3132472-3140928 Glycine max
Glyma.03G028800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3139929-3140928 Glycine max
Glyma.03G028800 1.0kb downstream 1.0kb downstream 8457 true Chr03: 3131472-3139928 Glycine max
Glyma.03G028800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3131472-3132471 Glycine max
Glyma.03G028800 2.0kb upstream 2.0kb upstream 9457 true Chr03: 3132472-3141928 Glycine max
Glyma.03G028800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3139929-3141928 Glycine max
Glyma.03G028800 2.0kb downstream 2.0kb downstream 9457 true Chr03: 3130472-3139928 Glycine max
Glyma.03G028800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3130472-3132471 Glycine max
Glyma.03G028800 5.0kb upstream 5.0kb upstream 12457 true Chr03: 3132472-3144928 Glycine max
Glyma.03G028800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3139929-3144928 Glycine max
Glyma.03G028800 5.0kb downstream 5.0kb downstream 12457 true Chr03: 3127472-3139928 Glycine max
Glyma.03G028800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3127472-3132471 Glycine max
Glyma.03G028800 10.0kb upstream 10.0kb upstream 17457 true Chr03: 3132472-3149928 Glycine max
Glyma.03G028800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3139929-3149928 Glycine max
Glyma.03G028800 10.0kb downstream 10.0kb downstream 17457 true Chr03: 3122472-3139928 Glycine max
Glyma.03G028800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3122472-3132471 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026230 5273 Angiosperm View MSA
122304175 5265 Fabidae View MSA
124062332 5270 Rosid View MSA
123740512 5271 Pentapetalae View MSA
122787806 5272 Eudicot View MSA
123429177 5275 Viridiplantae View MSA
121350168 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6417 0.0 28.8097    
cufflinks 8.031 0.0 22.1598   Low
cufflinks 13.3255 0.0 35.7032    
cufflinks 7.78547 0.0 21.5284   Low
cufflinks 14.7973 0.0 39.5723    
cufflinks 18.1767 0.0 48.4931   High
cufflinks 8.41933 0.0 23.1835   Low
cufflinks 12.7547 0.0 34.2265    
cufflinks 12.5451 0.0 33.6949    
cufflinks 1.993        
cufflinks 2.492        
cufflinks 2.244        
cufflinks 4.027       High
cufflinks 4.83       High
cufflinks 2.526        
cufflinks 1.948        
cufflinks 2.371        
cufflinks 2.265        
cufflinks 2.323        
cufflinks 2.035        
cufflinks 3.06        
cufflinks 1.938        
cufflinks 2.019        
cufflinks 3.023        
cufflinks 1.973        
cufflinks 3.341       High

0 Strain