Gene : Glyma.03G029600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31374:SF56 - AUXIN-REGULATED PROTEIN-RELATED Genomic Order:  296
Name:  ? Glyma.03G029600 Secondary Identifier:  ? PAC:30516761
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G029600 0.5kb upstream 0.5kb upstream 2186 true Chr03: 3253478-3255663 Glycine max
Glyma.03G029600 0.5kb upstream 0.5kb upstream 500 false Chr03: 3255164-3255663 Glycine max
Glyma.03G029600 0.5kb downstream 0.5kb downstream 2186 true Chr03: 3252978-3255163 Glycine max
Glyma.03G029600 0.5kb downstream 0.5kb downstream 500 false Chr03: 3252978-3253477 Glycine max
Glyma.03G029600 1.0kb upstream 1.0kb upstream 2686 true Chr03: 3253478-3256163 Glycine max
Glyma.03G029600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3255164-3256163 Glycine max
Glyma.03G029600 1.0kb downstream 1.0kb downstream 2686 true Chr03: 3252478-3255163 Glycine max
Glyma.03G029600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3252478-3253477 Glycine max
Glyma.03G029600 2.0kb upstream 2.0kb upstream 3686 true Chr03: 3253478-3257163 Glycine max
Glyma.03G029600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3255164-3257163 Glycine max
Glyma.03G029600 2.0kb downstream 2.0kb downstream 3686 true Chr03: 3251478-3255163 Glycine max
Glyma.03G029600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3251478-3253477 Glycine max
Glyma.03G029600 5.0kb upstream 5.0kb upstream 6686 true Chr03: 3253478-3260163 Glycine max
Glyma.03G029600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3255164-3260163 Glycine max
Glyma.03G029600 5.0kb downstream 5.0kb downstream 6686 true Chr03: 3248478-3255163 Glycine max
Glyma.03G029600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3248478-3253477 Glycine max
Glyma.03G029600 10.0kb upstream 10.0kb upstream 11686 true Chr03: 3253478-3265163 Glycine max
Glyma.03G029600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3255164-3265163 Glycine max
Glyma.03G029600 10.0kb downstream 10.0kb downstream 11686 true Chr03: 3243478-3255163 Glycine max
Glyma.03G029600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3243478-3253477 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301915 5265 Fabidae View MSA
124066518 5270 Rosid View MSA
123741344 5271 Pentapetalae View MSA
122791593 5272 Eudicot View MSA
122049926 5273 Angiosperm View MSA
121311651 5274 Embryophyte View MSA
123348921 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.99797 0.0 12.3485    
cufflinks 0.822207 0.0 2.99934    
cufflinks 9.08372 0.0 25.4026   High
cufflinks 0.739009 0.0 2.71059    
cufflinks 3.13081 0.0 9.9638    
cufflinks 2.37939 0.0 7.87735    
cufflinks 0.761158 0.0 2.78453    
cufflinks 0.61215 0.0 2.26814   Low
cufflinks 4.62832 0.0 13.977    
cufflinks 3.964        
cufflinks 21.78     High High
cufflinks 13.618     High  
cufflinks 3.366        
cufflinks 2.463        
cufflinks 3.853        
cufflinks 1.064        
cufflinks 15.143     High  
cufflinks 13.559     High  
cufflinks 1.003        
cufflinks 0.526       Low
cufflinks 9.584     High  
cufflinks 1.119        
cufflinks 1.083        
cufflinks 36.425     High High
cufflinks 0.447       Low
cufflinks 14.985     High  

0 Strain