Gene : Glyma.03G027900 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG2707 - Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) Genomic Order:  279
Name:  ? Glyma.03G027900 Secondary Identifier:  ? PAC:30515504
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-1587 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G027900 0.5kb upstream 0.5kb upstream 13271 true Chr03: 3048805-3062075 Glycine max
Glyma.03G027900 0.5kb upstream 0.5kb upstream 500 false Chr03: 3061576-3062075 Glycine max
Glyma.03G027900 0.5kb downstream 0.5kb downstream 13271 true Chr03: 3048305-3061575 Glycine max
Glyma.03G027900 0.5kb downstream 0.5kb downstream 500 false Chr03: 3048305-3048804 Glycine max
Glyma.03G027900 1.0kb upstream 1.0kb upstream 13771 true Chr03: 3048805-3062575 Glycine max
Glyma.03G027900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3061576-3062575 Glycine max
Glyma.03G027900 1.0kb downstream 1.0kb downstream 13771 true Chr03: 3047805-3061575 Glycine max
Glyma.03G027900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3047805-3048804 Glycine max
Glyma.03G027900 2.0kb upstream 2.0kb upstream 14771 true Chr03: 3048805-3063575 Glycine max
Glyma.03G027900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3061576-3063575 Glycine max
Glyma.03G027900 2.0kb downstream 2.0kb downstream 14771 true Chr03: 3046805-3061575 Glycine max
Glyma.03G027900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3046805-3048804 Glycine max
Glyma.03G027900 5.0kb upstream 5.0kb upstream 17771 true Chr03: 3048805-3066575 Glycine max
Glyma.03G027900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3061576-3066575 Glycine max
Glyma.03G027900 5.0kb downstream 5.0kb downstream 17771 true Chr03: 3043805-3061575 Glycine max
Glyma.03G027900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3043805-3048804 Glycine max
Glyma.03G027900 10.0kb upstream 10.0kb upstream 22771 true Chr03: 3048805-3071575 Glycine max
Glyma.03G027900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3061576-3071575 Glycine max
Glyma.03G027900 10.0kb downstream 10.0kb downstream 22771 true Chr03: 3038805-3061575 Glycine max
Glyma.03G027900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3038805-3048804 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298994 5265 Fabidae View MSA
124066071 5270 Rosid View MSA
123747951 5271 Pentapetalae View MSA
122791458 5272 Eudicot View MSA
122043416 5273 Angiosperm View MSA
121345797 5274 Embryophyte View MSA
123425080 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.04785 0.0 18.9819   High
cufflinks 3.6964 0.0 18.0739    
cufflinks 2.759 0.0 14.7369    
cufflinks 2.95531 0.0 13.8931    
cufflinks 2.50162 0.0 14.6145    
cufflinks 1.89408 0.0 10.1138   Low
cufflinks 3.8689 0.0 18.349   High
cufflinks 2.66887 0.0 14.5629    
cufflinks 2.04618 0.0 11.9866   Low
cufflinks 0.12        
cufflinks 0.031     Low Low
cufflinks 0.234        
cufflinks 0.146        
cufflinks 0.197        
cufflinks 0.121        
cufflinks 0.267        
cufflinks 0.065     Low  
cufflinks 0.269        
cufflinks 0.349       High
cufflinks 0.265        
cufflinks 0.038     Low Low
cufflinks 0.313        
cufflinks 0.305        
cufflinks 0.033     Low Low
cufflinks 0.26        
cufflinks 0.042     Low Low

0 Strain