Gene : Glyma.03G031800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31636:SF11 - SCARECROW-LIKE PROTEIN 22-RELATED Genomic Order:  318
Name:  ? Glyma.03G031800 Secondary Identifier:  ? PAC:30517549
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G031800 0.5kb upstream 0.5kb upstream 3552 true Chr03: 3602603-3606154 Glycine max
Glyma.03G031800 0.5kb upstream 0.5kb upstream 500 false Chr03: 3605655-3606154 Glycine max
Glyma.03G031800 0.5kb downstream 0.5kb downstream 3552 true Chr03: 3602103-3605654 Glycine max
Glyma.03G031800 0.5kb downstream 0.5kb downstream 500 false Chr03: 3602103-3602602 Glycine max
Glyma.03G031800 1.0kb upstream 1.0kb upstream 4052 true Chr03: 3602603-3606654 Glycine max
Glyma.03G031800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3605655-3606654 Glycine max
Glyma.03G031800 1.0kb downstream 1.0kb downstream 4052 true Chr03: 3601603-3605654 Glycine max
Glyma.03G031800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3601603-3602602 Glycine max
Glyma.03G031800 2.0kb upstream 2.0kb upstream 5052 true Chr03: 3602603-3607654 Glycine max
Glyma.03G031800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3605655-3607654 Glycine max
Glyma.03G031800 2.0kb downstream 2.0kb downstream 5052 true Chr03: 3600603-3605654 Glycine max
Glyma.03G031800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3600603-3602602 Glycine max
Glyma.03G031800 5.0kb upstream 5.0kb upstream 8052 true Chr03: 3602603-3610654 Glycine max
Glyma.03G031800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3605655-3610654 Glycine max
Glyma.03G031800 5.0kb downstream 5.0kb downstream 8052 true Chr03: 3597603-3605654 Glycine max
Glyma.03G031800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3597603-3602602 Glycine max
Glyma.03G031800 10.0kb upstream 10.0kb upstream 13052 true Chr03: 3602603-3615654 Glycine max
Glyma.03G031800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3605655-3615654 Glycine max
Glyma.03G031800 10.0kb downstream 10.0kb downstream 13052 true Chr03: 3592603-3605654 Glycine max
Glyma.03G031800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3592603-3602602 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253972 5265 Fabidae View MSA
124067297 5270 Rosid View MSA
123748991 5271 Pentapetalae View MSA
122793941 5272 Eudicot View MSA
122048418 5273 Angiosperm View MSA
121350524 5274 Embryophyte View MSA
123381771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.5347 0.0 39.4909    
cufflinks 14.6851 0.0 51.0524    
cufflinks 23.2416 0.0 86.864 High High
cufflinks 13.1221 0.0 45.2984    
cufflinks 15.6091 0.0 54.5853    
cufflinks 11.4034 0.0 39.0312    
cufflinks 7.11378 0.0 24.6441   Low
cufflinks 9.22956 0.0 31.5586    
cufflinks 15.7257 0.0 55.0635    
cufflinks 5.955        
cufflinks 2.371       Low
cufflinks 10.583     High High
cufflinks 9.128     High  
cufflinks 10.859     High High
cufflinks 3.416        
cufflinks 8.248     High  
cufflinks 1.227       Low
cufflinks 4.779        
cufflinks 9.974     High  
cufflinks 6.776        
cufflinks 2.538       Low
cufflinks 8.667     High  
cufflinks 10.007     High  
cufflinks 3.395        
cufflinks 5.342        
cufflinks 2.172       Low

0 Strain