Gene : Glyma.19G068800 G. max Wm82.a2.v1
Defline:  (1 of 6) PF02373//PF10497 - JmjC domain, hydroxylase (JmjC) // Zinc-finger domain of monoamine-oxidase A repressor R1 (zf-4CXXC_R1) Genomic Order:  688
Name:  ? Glyma.19G068800 Secondary Identifier:  ? PAC:30514263
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G068800 0.5kb upstream 0.5kb upstream 7941 true Chr19: 21394812-21402752 Glycine max
Glyma.19G068800 0.5kb upstream 0.5kb upstream 500 false Chr19: 21394812-21395311 Glycine max
Glyma.19G068800 0.5kb downstream 0.5kb downstream 7941 true Chr19: 21395312-21403252 Glycine max
Glyma.19G068800 0.5kb downstream 0.5kb downstream 500 false Chr19: 21402753-21403252 Glycine max
Glyma.19G068800 1.0kb upstream 1.0kb upstream 8441 true Chr19: 21394312-21402752 Glycine max
Glyma.19G068800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 21394312-21395311 Glycine max
Glyma.19G068800 1.0kb downstream 1.0kb downstream 8441 true Chr19: 21395312-21403752 Glycine max
Glyma.19G068800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 21402753-21403752 Glycine max
Glyma.19G068800 2.0kb upstream 2.0kb upstream 9441 true Chr19: 21393312-21402752 Glycine max
Glyma.19G068800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 21393312-21395311 Glycine max
Glyma.19G068800 2.0kb downstream 2.0kb downstream 9441 true Chr19: 21395312-21404752 Glycine max
Glyma.19G068800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 21402753-21404752 Glycine max
Glyma.19G068800 5.0kb upstream 5.0kb upstream 12441 true Chr19: 21390312-21402752 Glycine max
Glyma.19G068800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 21390312-21395311 Glycine max
Glyma.19G068800 5.0kb downstream 5.0kb downstream 12441 true Chr19: 21395312-21407752 Glycine max
Glyma.19G068800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 21402753-21407752 Glycine max
Glyma.19G068800 10.0kb upstream 10.0kb upstream 17441 true Chr19: 21385312-21402752 Glycine max
Glyma.19G068800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 21385312-21395311 Glycine max
Glyma.19G068800 10.0kb downstream 10.0kb downstream 17441 true Chr19: 21395312-21412752 Glycine max
Glyma.19G068800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 21402753-21412752 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314720 5265 Fabidae View MSA
124073545 5270 Rosid View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.99679 0.0 29.6575    
cufflinks 8.90244 0.0 26.581    
cufflinks 15.6077 0.0 48.4441   High
cufflinks 10.5217 0.0 31.3829    
cufflinks 5.8477 0.0 17.8645   Low
cufflinks 4.73422 0.0 14.8423   Low
cufflinks 7.42138 0.0 22.2405    
cufflinks 7.89964 0.0 23.665    
cufflinks 9.01761 0.0 26.8058    
cufflinks 3.488       Low
cufflinks 4.745        
cufflinks 9.468     High High
cufflinks 3.918       Low
cufflinks 3.525       Low
cufflinks 6.6     High  
cufflinks 6.111        
cufflinks 3.308       Low
cufflinks 7.845     High High
cufflinks 6.855        
cufflinks 7.403     High  
cufflinks 4.195        
cufflinks 7.468     High  
cufflinks 5.542        
cufflinks 5.188        
cufflinks 7.207     High  
cufflinks 4.78        

0 Strain