Gene : Glyma.03G219500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11731:SF117 - GLUTAMYL ENDOPEPTIDASE, CHLOROPLASTIC-RELATED Genomic Order:  2195
Name:  ? Glyma.03G219500 Secondary Identifier:  ? PAC:30517318
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G219500 0.5kb upstream 0.5kb upstream 6891 true Chr03: 42296800-42303690 Glycine max
Glyma.03G219500 0.5kb upstream 0.5kb upstream 500 false Chr03: 42296800-42297299 Glycine max
Glyma.03G219500 0.5kb downstream 0.5kb downstream 6891 true Chr03: 42297300-42304190 Glycine max
Glyma.03G219500 0.5kb downstream 0.5kb downstream 500 false Chr03: 42303691-42304190 Glycine max
Glyma.03G219500 1.0kb upstream 1.0kb upstream 7391 true Chr03: 42296300-42303690 Glycine max
Glyma.03G219500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42296300-42297299 Glycine max
Glyma.03G219500 1.0kb downstream 1.0kb downstream 7391 true Chr03: 42297300-42304690 Glycine max
Glyma.03G219500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42303691-42304690 Glycine max
Glyma.03G219500 2.0kb upstream 2.0kb upstream 8391 true Chr03: 42295300-42303690 Glycine max
Glyma.03G219500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42295300-42297299 Glycine max
Glyma.03G219500 2.0kb downstream 2.0kb downstream 8391 true Chr03: 42297300-42305690 Glycine max
Glyma.03G219500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42303691-42305690 Glycine max
Glyma.03G219500 5.0kb upstream 5.0kb upstream 11391 true Chr03: 42292300-42303690 Glycine max
Glyma.03G219500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42292300-42297299 Glycine max
Glyma.03G219500 5.0kb downstream 5.0kb downstream 11391 true Chr03: 42297300-42308690 Glycine max
Glyma.03G219500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42303691-42308690 Glycine max
Glyma.03G219500 10.0kb upstream 10.0kb upstream 16391 true Chr03: 42287300-42303690 Glycine max
Glyma.03G219500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42287300-42297299 Glycine max
Glyma.03G219500 10.0kb downstream 10.0kb downstream 16391 true Chr03: 42297300-42313690 Glycine max
Glyma.03G219500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42303691-42313690 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308808 5265 Fabidae View MSA
124067923 5270 Rosid View MSA
123737130 5271 Pentapetalae View MSA
122791183 5272 Eudicot View MSA
122045375 5273 Angiosperm View MSA
121345233 5274 Embryophyte View MSA
123426148 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.2332 0.0 103.047 High High
cufflinks 8.71105 0.0 25.8379    
cufflinks 9.8001 0.0 38.2413    
cufflinks 10.9264 0.0 32.7072    
cufflinks 10.1569 0.0 39.2227    
cufflinks 8.1094 0.0 24.046    
cufflinks 10.5426 0.0 40.592    
cufflinks 8.84298 0.0 34.5621    
cufflinks 6.56955 0.0 26.4448   Low
cufflinks 3.11        
cufflinks 1.186       Low
cufflinks 3.602        
cufflinks 4.114        
cufflinks 4.423        
cufflinks 1.456       Low
cufflinks 7.323     High High
cufflinks 1.644       Low
cufflinks 3.813        
cufflinks 4.899        
cufflinks 7.717     High High
cufflinks 1.584       Low
cufflinks 8.46     High High
cufflinks 5.685        
cufflinks 1.463       Low
cufflinks 8.366     High High
cufflinks 1.989        

0 Strain