Gene : Glyma.03G237300 G. max Wm82.a2.v1
Defline:  (1 of 35) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  2373
Name:  ? Glyma.03G237300 Secondary Identifier:  ? PAC:30515419
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G237300 0.5kb upstream 0.5kb upstream 7388 true Chr03: 43723483-43730870 Glycine max
Glyma.03G237300 0.5kb upstream 0.5kb upstream 500 false Chr03: 43730371-43730870 Glycine max
Glyma.03G237300 0.5kb downstream 0.5kb downstream 7388 true Chr03: 43722983-43730370 Glycine max
Glyma.03G237300 0.5kb downstream 0.5kb downstream 500 false Chr03: 43722983-43723482 Glycine max
Glyma.03G237300 1.0kb upstream 1.0kb upstream 7888 true Chr03: 43723483-43731370 Glycine max
Glyma.03G237300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43730371-43731370 Glycine max
Glyma.03G237300 1.0kb downstream 1.0kb downstream 7888 true Chr03: 43722483-43730370 Glycine max
Glyma.03G237300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43722483-43723482 Glycine max
Glyma.03G237300 2.0kb upstream 2.0kb upstream 8888 true Chr03: 43723483-43732370 Glycine max
Glyma.03G237300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43730371-43732370 Glycine max
Glyma.03G237300 2.0kb downstream 2.0kb downstream 8888 true Chr03: 43721483-43730370 Glycine max
Glyma.03G237300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43721483-43723482 Glycine max
Glyma.03G237300 5.0kb upstream 5.0kb upstream 11888 true Chr03: 43723483-43735370 Glycine max
Glyma.03G237300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43730371-43735370 Glycine max
Glyma.03G237300 5.0kb downstream 5.0kb downstream 11888 true Chr03: 43718483-43730370 Glycine max
Glyma.03G237300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43718483-43723482 Glycine max
Glyma.03G237300 10.0kb upstream 10.0kb upstream 16888 true Chr03: 43723483-43740370 Glycine max
Glyma.03G237300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43730371-43740370 Glycine max
Glyma.03G237300 10.0kb downstream 10.0kb downstream 16888 true Chr03: 43713483-43730370 Glycine max
Glyma.03G237300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43713483-43723482 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
122300906 5265 Fabidae View MSA
124071703 5270 Rosid View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.790836 0.0 4.27081   Low
cufflinks 7.38396 0.0 25.8727   High
cufflinks 2.1588 0.0 8.23185    
cufflinks 1.19827 0.0 4.33808   Low
cufflinks 2.91898 0.0 10.4056    
cufflinks 2.33124 0.0 8.81529    
cufflinks 5.22584 0.0 19.1972   High
cufflinks 2.18154 0.0 8.34617    
cufflinks 2.40517 0.0 8.96677    
cufflinks 0.274        
cufflinks 0.131        
cufflinks 0.739       High
cufflinks 0.002     Low Low
cufflinks 0.004     Low Low
cufflinks 0.476        
cufflinks 0.518        
cufflinks 0.01     Low Low
cufflinks 0.163        
cufflinks 0.76       High
cufflinks 0.128        
cufflinks 0.042     Low  
cufflinks 0.271        
cufflinks 0.346        
cufflinks 0.051     Low  
cufflinks 0.247        
cufflinks 0.055     Low  

0 Strain