Gene : Glyma.03G255000 G. max Wm82.a2.v1

Defline:  (1 of 5) PTHR22952:SF144 - G-BOX-BINDING FACTOR 2-RELATED Genomic Order:  2550
Name:  ? Glyma.03G255000 Secondary Identifier:  ? PAC:30516903

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G255000 0.5kb upstream 0.5kb upstream 6964 true Chr03: 45014696-45021659 Glycine max
Glyma.03G255000 0.5kb upstream 0.5kb upstream 500 false Chr03: 45014696-45015195 Glycine max
Glyma.03G255000 0.5kb downstream 0.5kb downstream 6964 true Chr03: 45015196-45022159 Glycine max
Glyma.03G255000 0.5kb downstream 0.5kb downstream 500 false Chr03: 45021660-45022159 Glycine max
Glyma.03G255000 1.0kb upstream 1.0kb upstream 7464 true Chr03: 45014196-45021659 Glycine max
Glyma.03G255000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45014196-45015195 Glycine max
Glyma.03G255000 1.0kb downstream 1.0kb downstream 7464 true Chr03: 45015196-45022659 Glycine max
Glyma.03G255000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45021660-45022659 Glycine max
Glyma.03G255000 2.0kb upstream 2.0kb upstream 8464 true Chr03: 45013196-45021659 Glycine max
Glyma.03G255000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45013196-45015195 Glycine max
Glyma.03G255000 2.0kb downstream 2.0kb downstream 8464 true Chr03: 45015196-45023659 Glycine max
Glyma.03G255000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45021660-45023659 Glycine max
Glyma.03G255000 5.0kb upstream 5.0kb upstream 11464 true Chr03: 45010196-45021659 Glycine max
Glyma.03G255000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45010196-45015195 Glycine max
Glyma.03G255000 5.0kb downstream 5.0kb downstream 11464 true Chr03: 45015196-45026659 Glycine max
Glyma.03G255000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45021660-45026659 Glycine max
Glyma.03G255000 10.0kb upstream 10.0kb upstream 16464 true Chr03: 45005196-45021659 Glycine max
Glyma.03G255000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45005196-45015195 Glycine max
Glyma.03G255000 10.0kb downstream 10.0kb downstream 16464 true Chr03: 45015196-45031659 Glycine max
Glyma.03G255000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45021660-45031659 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309767 5265 Fabidae View MSA
124060695 5270 Rosid View MSA
123750694 5271 Pentapetalae View MSA
122796878 5272 Eudicot View MSA
122043515 5273 Angiosperm View MSA
121310141 5274 Embryophyte View MSA
123347711 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.94963 0.0 33.9618    
cufflinks 7.08063 0.0 33.1704    
cufflinks 10.5427 0.0 47.4483    
cufflinks 6.01565 0.0 29.1191   Low
cufflinks 14.2212 0.0 67.1289   High
cufflinks 14.298 0.0 57.9816   High
cufflinks 8.607 0.0 39.3627    
cufflinks 5.79449 0.0 28.3604   Low
cufflinks 10.9067 0.0 48.5033    
cufflinks 0.44        
cufflinks 0.163       Low
cufflinks 0.759       High
cufflinks 1.045       High
cufflinks 0.746       High
cufflinks 0.285        
cufflinks 0.269        
cufflinks 0.313        
cufflinks 0.896       High
cufflinks 0.441        
cufflinks 0.207        
cufflinks 0.107       Low
cufflinks 0.26        
cufflinks 0.454        
cufflinks 0.2        
cufflinks 0.327        
cufflinks 0.253        

0 Strain