Gene : Glyma.03G005700 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.3.3.13//2.3.3.14 - 2-isopropylmalate synthase / Isopropylmalate synthetase // Homocitrate synthase / Homocitrate synthetase Genomic Order:  57
Name:  ? Glyma.03G005700 Secondary Identifier:  ? PAC:30518331
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax BRANCHED-CHAIN-AA-SYN-PWY Glycine max pathologic  
Gmax LEUSYN-PWY Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G005700 0.5kb upstream 0.5kb upstream 7487 true Chr03: 521423-528909 Glycine max
Glyma.03G005700 0.5kb upstream 0.5kb upstream 500 false Chr03: 528410-528909 Glycine max
Glyma.03G005700 0.5kb downstream 0.5kb downstream 7487 true Chr03: 520923-528409 Glycine max
Glyma.03G005700 0.5kb downstream 0.5kb downstream 500 false Chr03: 520923-521422 Glycine max
Glyma.03G005700 1.0kb upstream 1.0kb upstream 7987 true Chr03: 521423-529409 Glycine max
Glyma.03G005700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 528410-529409 Glycine max
Glyma.03G005700 1.0kb downstream 1.0kb downstream 7987 true Chr03: 520423-528409 Glycine max
Glyma.03G005700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 520423-521422 Glycine max
Glyma.03G005700 2.0kb upstream 2.0kb upstream 8987 true Chr03: 521423-530409 Glycine max
Glyma.03G005700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 528410-530409 Glycine max
Glyma.03G005700 2.0kb downstream 2.0kb downstream 8987 true Chr03: 519423-528409 Glycine max
Glyma.03G005700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 519423-521422 Glycine max
Glyma.03G005700 5.0kb upstream 5.0kb upstream 11987 true Chr03: 521423-533409 Glycine max
Glyma.03G005700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 528410-533409 Glycine max
Glyma.03G005700 5.0kb downstream 5.0kb downstream 11987 true Chr03: 516423-528409 Glycine max
Glyma.03G005700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 516423-521422 Glycine max
Glyma.03G005700 10.0kb upstream 10.0kb upstream 16987 true Chr03: 521423-538409 Glycine max
Glyma.03G005700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 528410-538409 Glycine max
Glyma.03G005700 10.0kb downstream 10.0kb downstream 16987 true Chr03: 511423-528409 Glycine max
Glyma.03G005700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 511423-521422 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250492 5265 Fabidae View MSA
124073887 5270 Rosid View MSA
123749835 5271 Pentapetalae View MSA
122795041 5272 Eudicot View MSA
122042075 5273 Angiosperm View MSA
121343846 5274 Embryophyte View MSA
123424493 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.0773 0.0 19.5069   High
cufflinks 3.47026 0.0 10.323    
cufflinks 0.812007 0.0 2.88902    
cufflinks 0.0931147 0.0 0.368102 Low Low
cufflinks 5.39545 0.0 15.2706   High
cufflinks 1.51343 0.0 5.08138    
cufflinks 0.171631 0.0 0.662162 Low Low
cufflinks 0.412621 0.0 1.53028    
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.036       High
cufflinks 0.01     Low  
cufflinks 0.01     Low  
cufflinks 1.613       High
cufflinks 0.067     Low  
cufflinks 0.004     Low Low
cufflinks 3.473       High
cufflinks 5.619       High
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.045     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain