Gene : Glyma.03G100800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10210:SF58 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 5, CHLOROPLASTIC Genomic Order:  1008
Name:  ? Glyma.03G100800 Secondary Identifier:  ? PAC:30515287
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-662 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G100800 0.5kb upstream 0.5kb upstream 8687 true Chr03: 28979878-28988564 Glycine max
Glyma.03G100800 0.5kb upstream 0.5kb upstream 500 false Chr03: 28979878-28980377 Glycine max
Glyma.03G100800 0.5kb downstream 0.5kb downstream 8687 true Chr03: 28980378-28989064 Glycine max
Glyma.03G100800 0.5kb downstream 0.5kb downstream 500 false Chr03: 28988565-28989064 Glycine max
Glyma.03G100800 1.0kb upstream 1.0kb upstream 9187 true Chr03: 28979378-28988564 Glycine max
Glyma.03G100800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 28979378-28980377 Glycine max
Glyma.03G100800 1.0kb downstream 1.0kb downstream 9187 true Chr03: 28980378-28989564 Glycine max
Glyma.03G100800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 28988565-28989564 Glycine max
Glyma.03G100800 2.0kb upstream 2.0kb upstream 10187 true Chr03: 28978378-28988564 Glycine max
Glyma.03G100800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 28978378-28980377 Glycine max
Glyma.03G100800 2.0kb downstream 2.0kb downstream 10187 true Chr03: 28980378-28990564 Glycine max
Glyma.03G100800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 28988565-28990564 Glycine max
Glyma.03G100800 5.0kb upstream 5.0kb upstream 13187 true Chr03: 28975378-28988564 Glycine max
Glyma.03G100800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 28975378-28980377 Glycine max
Glyma.03G100800 5.0kb downstream 5.0kb downstream 13187 true Chr03: 28980378-28993564 Glycine max
Glyma.03G100800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 28988565-28993564 Glycine max
Glyma.03G100800 10.0kb upstream 10.0kb upstream 18187 true Chr03: 28970378-28988564 Glycine max
Glyma.03G100800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 28970378-28980377 Glycine max
Glyma.03G100800 10.0kb downstream 10.0kb downstream 18187 true Chr03: 28980378-28998564 Glycine max
Glyma.03G100800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 28988565-28998564 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304636 5265 Fabidae View MSA
124060795 5270 Rosid View MSA
123749025 5271 Pentapetalae View MSA
122788028 5272 Eudicot View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.8361 0.0 121.207 High High
cufflinks 23.2971 0.0 86.8139 High  
cufflinks 20.1576 0.0 75.343    
cufflinks 19.0162 0.0 70.8962    
cufflinks 19.5701 0.0 73.2176    
cufflinks 19.689 0.0 73.6115    
cufflinks 14.4781 0.0 54.9915   Low
cufflinks 25.2506 0.0 94.632 High  
cufflinks 18.9397 0.0 70.7948    
cufflinks 1.297        
cufflinks 0.299       Low
cufflinks 1.205        
cufflinks 0.981        
cufflinks 1.11        
cufflinks 0.53       Low
cufflinks 1.777        
cufflinks 1.1        
cufflinks 1.34        
cufflinks 1.574        
cufflinks 2.124       High
cufflinks 0.494       Low
cufflinks 1.94       High
cufflinks 1.584        
cufflinks 0.37       Low
cufflinks 1.931       High
cufflinks 0.854        

0 Strain