Gene : Glyma.03G091000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11771//PTHR11771:SF59 - LIPOXYGENASE Genomic Order:  910
Name:  ? Glyma.03G091000 Secondary Identifier:  ? PAC:30519269
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G091000 0.5kb upstream 0.5kb upstream 8099 true Chr03: 27012800-27020898 Glycine max
Glyma.03G091000 0.5kb upstream 0.5kb upstream 500 false Chr03: 27012800-27013299 Glycine max
Glyma.03G091000 0.5kb downstream 0.5kb downstream 8099 true Chr03: 27013300-27021398 Glycine max
Glyma.03G091000 0.5kb downstream 0.5kb downstream 500 false Chr03: 27020899-27021398 Glycine max
Glyma.03G091000 1.0kb upstream 1.0kb upstream 8599 true Chr03: 27012300-27020898 Glycine max
Glyma.03G091000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 27012300-27013299 Glycine max
Glyma.03G091000 1.0kb downstream 1.0kb downstream 8599 true Chr03: 27013300-27021898 Glycine max
Glyma.03G091000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 27020899-27021898 Glycine max
Glyma.03G091000 2.0kb upstream 2.0kb upstream 9599 true Chr03: 27011300-27020898 Glycine max
Glyma.03G091000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 27011300-27013299 Glycine max
Glyma.03G091000 2.0kb downstream 2.0kb downstream 9599 true Chr03: 27013300-27022898 Glycine max
Glyma.03G091000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 27020899-27022898 Glycine max
Glyma.03G091000 5.0kb upstream 5.0kb upstream 12599 true Chr03: 27008300-27020898 Glycine max
Glyma.03G091000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 27008300-27013299 Glycine max
Glyma.03G091000 5.0kb downstream 5.0kb downstream 12599 true Chr03: 27013300-27025898 Glycine max
Glyma.03G091000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 27020899-27025898 Glycine max
Glyma.03G091000 10.0kb upstream 10.0kb upstream 17599 true Chr03: 27003300-27020898 Glycine max
Glyma.03G091000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 27003300-27013299 Glycine max
Glyma.03G091000 10.0kb downstream 10.0kb downstream 17599 true Chr03: 27013300-27030898 Glycine max
Glyma.03G091000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 27020899-27030898 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303150 5265 Fabidae View MSA
124071390 5270 Rosid View MSA
123750052 5271 Pentapetalae View MSA
122773445 5272 Eudicot View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0798921 0.0 0.313975 Low Low
cufflinks 0.349523 0.0 1.28612    
cufflinks 0.217886 0.0 0.81918    
cufflinks 0.193678 0.0 0.732676    
cufflinks 0.43693 0.0 1.58881   High
cufflinks 0.0895444 0.0 0.350472 Low Low
cufflinks 0.0772432 0.0 0.303982 Low Low
cufflinks 0.469532 0.0 1.69577   High
cufflinks 0.394673 0.0 1.44226    
cufflinks 0.522        
cufflinks 0.231        
cufflinks 0.17        
cufflinks 0.589       High
cufflinks 0.145        
cufflinks 0.025     Low Low
cufflinks 0.329        
cufflinks 0.155        
cufflinks 0.55       High
cufflinks 0.106       Low
cufflinks 0.433        
cufflinks 0.278        
cufflinks 0.485        
cufflinks 0.247        
cufflinks 0.127        
cufflinks 0.361        
cufflinks 0.324        

0 Strain