Gene : Glyma.03G121000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10145 - TRANSCRIPTION ELONGATION FACTOR SPT6 Genomic Order:  1210
Name:  ? Glyma.03G121000 Secondary Identifier:  ? PAC:30519409
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G121000 0.5kb upstream 0.5kb upstream 9765 true Chr03: 33279455-33289219 Glycine max
Glyma.03G121000 0.5kb upstream 0.5kb upstream 500 false Chr03: 33288720-33289219 Glycine max
Glyma.03G121000 0.5kb downstream 0.5kb downstream 9765 true Chr03: 33278955-33288719 Glycine max
Glyma.03G121000 0.5kb downstream 0.5kb downstream 500 false Chr03: 33278955-33279454 Glycine max
Glyma.03G121000 1.0kb upstream 1.0kb upstream 10265 true Chr03: 33279455-33289719 Glycine max
Glyma.03G121000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33288720-33289719 Glycine max
Glyma.03G121000 1.0kb downstream 1.0kb downstream 10265 true Chr03: 33278455-33288719 Glycine max
Glyma.03G121000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33278455-33279454 Glycine max
Glyma.03G121000 2.0kb upstream 2.0kb upstream 11265 true Chr03: 33279455-33290719 Glycine max
Glyma.03G121000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33288720-33290719 Glycine max
Glyma.03G121000 2.0kb downstream 2.0kb downstream 11265 true Chr03: 33277455-33288719 Glycine max
Glyma.03G121000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33277455-33279454 Glycine max
Glyma.03G121000 5.0kb upstream 5.0kb upstream 14265 true Chr03: 33279455-33293719 Glycine max
Glyma.03G121000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33288720-33293719 Glycine max
Glyma.03G121000 5.0kb downstream 5.0kb downstream 14265 true Chr03: 33274455-33288719 Glycine max
Glyma.03G121000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33274455-33279454 Glycine max
Glyma.03G121000 10.0kb upstream 10.0kb upstream 19265 true Chr03: 33279455-33298719 Glycine max
Glyma.03G121000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33288720-33298719 Glycine max
Glyma.03G121000 10.0kb downstream 10.0kb downstream 19265 true Chr03: 33269455-33288719 Glycine max
Glyma.03G121000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33269455-33279454 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307042 5265 Fabidae View MSA
124072790 5270 Rosid View MSA
123737056 5271 Pentapetalae View MSA
122788563 5272 Eudicot View MSA
122044627 5273 Angiosperm View MSA
121347900 5274 Embryophyte View MSA
123426736 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4528 0.0 38.1804    
cufflinks 22.2638 0.0 67.7451 High  
cufflinks 23.9074 0.0 74.1658 High  
cufflinks 17.4217 0.0 51.2152    
cufflinks 16.527 0.0 48.1138    
cufflinks 11.135 0.0 30.9419   Low
cufflinks 32.752 0.0 106.89 High High
cufflinks 15.6583 0.0 45.3109    
cufflinks 17.6257 0.0 51.7507    
cufflinks 11.364     High  
cufflinks 11.617     High  
cufflinks 17.585     High  
cufflinks 14.64     High  
cufflinks 16.353     High  
cufflinks 13.638     High  
cufflinks 19.874     High  
cufflinks 7.469     High Low
cufflinks 16.064     High  
cufflinks 23.508     High High
cufflinks 22.085     High High
cufflinks 10.954     High Low
cufflinks 21.973     High High
cufflinks 16.497     High  
cufflinks 12.864     High  
cufflinks 20.509     High  
cufflinks 11.319     High  

0 Strain