Gene : Glyma.03G119200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR16201:SF34 - LYSOSOMAL AMINO ACID TRANSPORTER 1 Genomic Order:  1192
Name:  ? Glyma.03G119200 Secondary Identifier:  ? PAC:30517905
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G119200 0.5kb upstream 0.5kb upstream 7010 true Chr03: 33003383-33010392 Glycine max
Glyma.03G119200 0.5kb upstream 0.5kb upstream 500 false Chr03: 33009893-33010392 Glycine max
Glyma.03G119200 0.5kb downstream 0.5kb downstream 7010 true Chr03: 33002883-33009892 Glycine max
Glyma.03G119200 0.5kb downstream 0.5kb downstream 500 false Chr03: 33002883-33003382 Glycine max
Glyma.03G119200 1.0kb upstream 1.0kb upstream 7510 true Chr03: 33003383-33010892 Glycine max
Glyma.03G119200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33009893-33010892 Glycine max
Glyma.03G119200 1.0kb downstream 1.0kb downstream 7510 true Chr03: 33002383-33009892 Glycine max
Glyma.03G119200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33002383-33003382 Glycine max
Glyma.03G119200 2.0kb upstream 2.0kb upstream 8510 true Chr03: 33003383-33011892 Glycine max
Glyma.03G119200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33009893-33011892 Glycine max
Glyma.03G119200 2.0kb downstream 2.0kb downstream 8510 true Chr03: 33001383-33009892 Glycine max
Glyma.03G119200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33001383-33003382 Glycine max
Glyma.03G119200 5.0kb upstream 5.0kb upstream 11510 true Chr03: 33003383-33014892 Glycine max
Glyma.03G119200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33009893-33014892 Glycine max
Glyma.03G119200 5.0kb downstream 5.0kb downstream 11510 true Chr03: 32998383-33009892 Glycine max
Glyma.03G119200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 32998383-33003382 Glycine max
Glyma.03G119200 10.0kb upstream 10.0kb upstream 16510 true Chr03: 33003383-33019892 Glycine max
Glyma.03G119200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33009893-33019892 Glycine max
Glyma.03G119200 10.0kb downstream 10.0kb downstream 16510 true Chr03: 32993383-33009892 Glycine max
Glyma.03G119200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 32993383-33003382 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302043 5265 Fabidae View MSA
124071732 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.87395 0.0 10.0411    
cufflinks 2.50523 0.0 16.4841    
cufflinks 1.67689 0.0 9.04788    
cufflinks 0.975859 0.0 6.17664   Low
cufflinks 9.62107 0.0 49.4591   High
cufflinks 2.47712 0.0 18.4334    
cufflinks 0.70396 0.0 4.45767   Low
cufflinks 3.62295 0.0 23.056    
cufflinks 3.61375 0.0 23.1189    
cufflinks 0.069     Low  
cufflinks 0.019     Low  
cufflinks 0.058     Low  
cufflinks 0.215       High
cufflinks 0.365       High
cufflinks 0.004     Low Low
cufflinks 0.019     Low  
cufflinks 0.04     Low  
cufflinks 0.13       High
cufflinks 0.061     Low  
cufflinks 0.018     Low  
cufflinks 0.018     Low  
cufflinks 0.016     Low  
cufflinks 0.03     Low  
cufflinks 0.025     Low  
cufflinks 0.017     Low  
cufflinks 0.029     Low  

0 Strain