Gene : Glyma.03G175800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30028 - UPF0014 INNER MEMBRANE PROTEIN YBBM-RELATED Genomic Order:  1758
Name:  ? Glyma.03G175800 Secondary Identifier:  ? PAC:30515371
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G175800 0.5kb upstream 0.5kb upstream 2901 true Chr03: 38903690-38906590 Glycine max
Glyma.03G175800 0.5kb upstream 0.5kb upstream 500 false Chr03: 38906091-38906590 Glycine max
Glyma.03G175800 0.5kb downstream 0.5kb downstream 2901 true Chr03: 38903190-38906090 Glycine max
Glyma.03G175800 0.5kb downstream 0.5kb downstream 500 false Chr03: 38903190-38903689 Glycine max
Glyma.03G175800 1.0kb upstream 1.0kb upstream 3401 true Chr03: 38903690-38907090 Glycine max
Glyma.03G175800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38906091-38907090 Glycine max
Glyma.03G175800 1.0kb downstream 1.0kb downstream 3401 true Chr03: 38902690-38906090 Glycine max
Glyma.03G175800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38902690-38903689 Glycine max
Glyma.03G175800 2.0kb upstream 2.0kb upstream 4401 true Chr03: 38903690-38908090 Glycine max
Glyma.03G175800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38906091-38908090 Glycine max
Glyma.03G175800 2.0kb downstream 2.0kb downstream 4401 true Chr03: 38901690-38906090 Glycine max
Glyma.03G175800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38901690-38903689 Glycine max
Glyma.03G175800 5.0kb upstream 5.0kb upstream 7401 true Chr03: 38903690-38911090 Glycine max
Glyma.03G175800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38906091-38911090 Glycine max
Glyma.03G175800 5.0kb downstream 5.0kb downstream 7401 true Chr03: 38898690-38906090 Glycine max
Glyma.03G175800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38898690-38903689 Glycine max
Glyma.03G175800 10.0kb upstream 10.0kb upstream 12401 true Chr03: 38903690-38916090 Glycine max
Glyma.03G175800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38906091-38916090 Glycine max
Glyma.03G175800 10.0kb downstream 10.0kb downstream 12401 true Chr03: 38893690-38906090 Glycine max
Glyma.03G175800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38893690-38903689 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309876 5265 Fabidae View MSA
124064060 5270 Rosid View MSA
123739826 5271 Pentapetalae View MSA
122792432 5272 Eudicot View MSA
122042449 5273 Angiosperm View MSA
121345105 5274 Embryophyte View MSA
123424866 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.55511 0.0 5.52265    
cufflinks 3.4874 0.0 11.4099    
cufflinks 1.50328 0.0 5.35041    
cufflinks 1.19705 0.0 4.32885    
cufflinks 8.17525 0.0 23.659    
cufflinks 17.2978 0.0 46.8033   High
cufflinks 1.14359 0.0 4.14246    
cufflinks 0.651958 0.0 2.43549   Low
cufflinks 14.3056 0.0 39.1695   High
cufflinks 0.619       Low
cufflinks 6.401     High  
cufflinks 2.056        
cufflinks 3.667        
cufflinks 7.041     High  
cufflinks 14.225     High High
cufflinks 6.516        
cufflinks 0.628       Low
cufflinks 7.984     High  
cufflinks 2.205        
cufflinks 6.724        
cufflinks 2.852        
cufflinks 4.938        
cufflinks 3.979        
cufflinks 4.897        
cufflinks 11.824     High High
cufflinks 1.831        

0 Strain