Gene : Glyma.03G181700 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR10362 - HISTIDINE AMMONIA-LYASE Genomic Order:  1817
Name:  ? Glyma.03G181700 Secondary Identifier:  ? PAC:30515498
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1121 Glycine max pathologic  
Gmax PWY1F-467 Glycine max pathologic  
Gmax PWY-7186 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G181700 0.5kb upstream 0.5kb upstream 4436 true Chr03: 39362177-39366612 Glycine max
Glyma.03G181700 0.5kb upstream 0.5kb upstream 500 false Chr03: 39362177-39362676 Glycine max
Glyma.03G181700 0.5kb downstream 0.5kb downstream 4436 true Chr03: 39362677-39367112 Glycine max
Glyma.03G181700 0.5kb downstream 0.5kb downstream 500 false Chr03: 39366613-39367112 Glycine max
Glyma.03G181700 1.0kb upstream 1.0kb upstream 4936 true Chr03: 39361677-39366612 Glycine max
Glyma.03G181700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39361677-39362676 Glycine max
Glyma.03G181700 1.0kb downstream 1.0kb downstream 4936 true Chr03: 39362677-39367612 Glycine max
Glyma.03G181700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39366613-39367612 Glycine max
Glyma.03G181700 2.0kb upstream 2.0kb upstream 5936 true Chr03: 39360677-39366612 Glycine max
Glyma.03G181700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39360677-39362676 Glycine max
Glyma.03G181700 2.0kb downstream 2.0kb downstream 5936 true Chr03: 39362677-39368612 Glycine max
Glyma.03G181700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39366613-39368612 Glycine max
Glyma.03G181700 5.0kb upstream 5.0kb upstream 8936 true Chr03: 39357677-39366612 Glycine max
Glyma.03G181700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39357677-39362676 Glycine max
Glyma.03G181700 5.0kb downstream 5.0kb downstream 8936 true Chr03: 39362677-39371612 Glycine max
Glyma.03G181700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39366613-39371612 Glycine max
Glyma.03G181700 10.0kb upstream 10.0kb upstream 13936 true Chr03: 39352677-39366612 Glycine max
Glyma.03G181700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39352677-39362676 Glycine max
Glyma.03G181700 10.0kb downstream 10.0kb downstream 13936 true Chr03: 39362677-39376612 Glycine max
Glyma.03G181700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39366613-39376612 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311537 5265 Fabidae View MSA
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.6035 0.0 39.035   High
cufflinks 5.93586 0.0 16.2471    
cufflinks 5.52298 0.0 15.1797    
cufflinks 2.8014 0.0 8.29091    
cufflinks 4.13808 0.0 11.6773    
cufflinks 5.87499 0.0 16.0777    
cufflinks 0.395149 0.0 1.44648   Low
cufflinks 5.34453 0.0 14.7101    
cufflinks 3.03461 0.0 8.88889    
cufflinks 3.883       High
cufflinks 2.949        
cufflinks 1.232        
cufflinks 2.823        
cufflinks 0.479       Low
cufflinks 0.482       Low
cufflinks 0.446       Low
cufflinks 1.777        
cufflinks 1.685        
cufflinks 1.371        
cufflinks 0.225       Low
cufflinks 1.45        
cufflinks 1.155        
cufflinks 1.602        
cufflinks 6.73     High High
cufflinks 0.34       Low
cufflinks 4.639       High

0 Strain