Gene : Glyma.03G190000 G. max Wm82.a2.v1
Defline:  (1 of 30) PF05003 - Protein of unknown function (DUF668) (DUF668) Genomic Order:  1900
Name:  ? Glyma.03G190000 Secondary Identifier:  ? PAC:30517143
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G190000 0.5kb upstream 0.5kb upstream 3109 true Chr03: 40080040-40083148 Glycine max
Glyma.03G190000 0.5kb upstream 0.5kb upstream 500 false Chr03: 40082649-40083148 Glycine max
Glyma.03G190000 0.5kb downstream 0.5kb downstream 3109 true Chr03: 40079540-40082648 Glycine max
Glyma.03G190000 0.5kb downstream 0.5kb downstream 500 false Chr03: 40079540-40080039 Glycine max
Glyma.03G190000 1.0kb upstream 1.0kb upstream 3609 true Chr03: 40080040-40083648 Glycine max
Glyma.03G190000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40082649-40083648 Glycine max
Glyma.03G190000 1.0kb downstream 1.0kb downstream 3609 true Chr03: 40079040-40082648 Glycine max
Glyma.03G190000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40079040-40080039 Glycine max
Glyma.03G190000 2.0kb upstream 2.0kb upstream 4609 true Chr03: 40080040-40084648 Glycine max
Glyma.03G190000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40082649-40084648 Glycine max
Glyma.03G190000 2.0kb downstream 2.0kb downstream 4609 true Chr03: 40078040-40082648 Glycine max
Glyma.03G190000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40078040-40080039 Glycine max
Glyma.03G190000 5.0kb upstream 5.0kb upstream 7609 true Chr03: 40080040-40087648 Glycine max
Glyma.03G190000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40082649-40087648 Glycine max
Glyma.03G190000 5.0kb downstream 5.0kb downstream 7609 true Chr03: 40075040-40082648 Glycine max
Glyma.03G190000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40075040-40080039 Glycine max
Glyma.03G190000 10.0kb upstream 10.0kb upstream 12609 true Chr03: 40080040-40092648 Glycine max
Glyma.03G190000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40082649-40092648 Glycine max
Glyma.03G190000 10.0kb downstream 10.0kb downstream 12609 true Chr03: 40070040-40082648 Glycine max
Glyma.03G190000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40070040-40080039 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304941 5265 Fabidae View MSA
124070488 5270 Rosid View MSA
123744675 5271 Pentapetalae View MSA
122797750 5272 Eudicot View MSA
122049619 5273 Angiosperm View MSA
121344351 5274 Embryophyte View MSA
123380027 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.2378 0.0 21.7398    
cufflinks 6.05946 0.0 27.9997    
cufflinks 2.42328 0.0 14.9665   Low
cufflinks 5.09083 0.0 31.7817    
cufflinks 3.89876 0.0 24.7288    
cufflinks 4.24813 0.0 23.9789    
cufflinks 9.89183 0.0 52.8266   High
cufflinks 4.78989 0.0 23.207    
cufflinks 5.73259 0.0 33.484    
cufflinks 0.337        
cufflinks 0.242       Low
cufflinks 0.492        
cufflinks 0.464        
cufflinks 0.459        
cufflinks 0.296       Low
cufflinks 0.588        
cufflinks 0.331        
cufflinks 0.605        
cufflinks 0.773       High
cufflinks 0.633       High
cufflinks 0.277       Low
cufflinks 0.602        
cufflinks 0.486        
cufflinks 0.33        
cufflinks 0.56        
cufflinks 0.277       Low

0 Strain