Gene : Glyma.03G194400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR21236:SF8 - INTEGRAL MEMBRANE YIP1 FAMILY PROTEIN Genomic Order:  1944
Name:  ? Glyma.03G194400 Secondary Identifier:  ? PAC:30517295
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G194400 0.5kb upstream 0.5kb upstream 1794 true Chr03: 40505356-40507149 Glycine max
Glyma.03G194400 0.5kb upstream 0.5kb upstream 500 false Chr03: 40505356-40505855 Glycine max
Glyma.03G194400 0.5kb downstream 0.5kb downstream 1794 true Chr03: 40505856-40507649 Glycine max
Glyma.03G194400 0.5kb downstream 0.5kb downstream 500 false Chr03: 40507150-40507649 Glycine max
Glyma.03G194400 1.0kb upstream 1.0kb upstream 2294 true Chr03: 40504856-40507149 Glycine max
Glyma.03G194400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40504856-40505855 Glycine max
Glyma.03G194400 1.0kb downstream 1.0kb downstream 2294 true Chr03: 40505856-40508149 Glycine max
Glyma.03G194400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40507150-40508149 Glycine max
Glyma.03G194400 2.0kb upstream 2.0kb upstream 3294 true Chr03: 40503856-40507149 Glycine max
Glyma.03G194400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40503856-40505855 Glycine max
Glyma.03G194400 2.0kb downstream 2.0kb downstream 3294 true Chr03: 40505856-40509149 Glycine max
Glyma.03G194400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40507150-40509149 Glycine max
Glyma.03G194400 5.0kb upstream 5.0kb upstream 6294 true Chr03: 40500856-40507149 Glycine max
Glyma.03G194400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40500856-40505855 Glycine max
Glyma.03G194400 5.0kb downstream 5.0kb downstream 6294 true Chr03: 40505856-40512149 Glycine max
Glyma.03G194400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40507150-40512149 Glycine max
Glyma.03G194400 10.0kb upstream 10.0kb upstream 11294 true Chr03: 40495856-40507149 Glycine max
Glyma.03G194400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40495856-40505855 Glycine max
Glyma.03G194400 10.0kb downstream 10.0kb downstream 11294 true Chr03: 40505856-40517149 Glycine max
Glyma.03G194400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40507150-40517149 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308811 5265 Fabidae View MSA
124071783 5270 Rosid View MSA
123751482 5271 Pentapetalae View MSA
122787116 5272 Eudicot View MSA
122046635 5273 Angiosperm View MSA
121346620 5274 Embryophyte View MSA
123427417 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.132 0.0 28.8311    
cufflinks 7.55494 0.0 22.4191   Low
cufflinks 9.38056 0.0 27.3151    
cufflinks 8.43092 0.0 24.6539    
cufflinks 12.1388 0.0 33.6802   High
cufflinks 9.50269 0.0 27.1621    
cufflinks 8.40889 0.0 24.357    
cufflinks 13.0917 0.0 36.3774   High
cufflinks 7.72374 0.0 22.7039   Low
cufflinks 6.838       High
cufflinks 3.571        
cufflinks 3.043        
cufflinks 4.987        
cufflinks 5.174       High
cufflinks 2.804       Low
cufflinks 3.369        
cufflinks 4.822        
cufflinks 3.953        
cufflinks 4.072        
cufflinks 3.02        
cufflinks 3.904        
cufflinks 2.85       Low
cufflinks 3.267        
cufflinks 3.533        
cufflinks 2.389       Low
cufflinks 6.267       High

0 Strain