Gene : Glyma.03G200000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT Genomic Order:  2000
Name:  ? Glyma.03G200000 Secondary Identifier:  ? PAC:30516637
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G200000 0.5kb upstream 0.5kb upstream 2028 true Chr03: 40887082-40889109 Glycine max
Glyma.03G200000 0.5kb upstream 0.5kb upstream 500 false Chr03: 40887082-40887581 Glycine max
Glyma.03G200000 0.5kb downstream 0.5kb downstream 2028 true Chr03: 40887582-40889609 Glycine max
Glyma.03G200000 0.5kb downstream 0.5kb downstream 500 false Chr03: 40889110-40889609 Glycine max
Glyma.03G200000 1.0kb upstream 1.0kb upstream 2528 true Chr03: 40886582-40889109 Glycine max
Glyma.03G200000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40886582-40887581 Glycine max
Glyma.03G200000 1.0kb downstream 1.0kb downstream 2528 true Chr03: 40887582-40890109 Glycine max
Glyma.03G200000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40889110-40890109 Glycine max
Glyma.03G200000 2.0kb upstream 2.0kb upstream 3528 true Chr03: 40885582-40889109 Glycine max
Glyma.03G200000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40885582-40887581 Glycine max
Glyma.03G200000 2.0kb downstream 2.0kb downstream 3528 true Chr03: 40887582-40891109 Glycine max
Glyma.03G200000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40889110-40891109 Glycine max
Glyma.03G200000 5.0kb upstream 5.0kb upstream 6528 true Chr03: 40882582-40889109 Glycine max
Glyma.03G200000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40882582-40887581 Glycine max
Glyma.03G200000 5.0kb downstream 5.0kb downstream 6528 true Chr03: 40887582-40894109 Glycine max
Glyma.03G200000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40889110-40894109 Glycine max
Glyma.03G200000 10.0kb upstream 10.0kb upstream 11528 true Chr03: 40877582-40889109 Glycine max
Glyma.03G200000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40877582-40887581 Glycine max
Glyma.03G200000 10.0kb downstream 10.0kb downstream 11528 true Chr03: 40887582-40899109 Glycine max
Glyma.03G200000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40889110-40899109 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121785019 5273 Angiosperm View MSA
122308675 5265 Fabidae View MSA
124037425 5270 Rosid View MSA
123757237 5271 Pentapetalae View MSA
122778306 5272 Eudicot View MSA
121056420 5274 Embryophyte View MSA
123096330 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0766 0.0 30.7063   High
cufflinks 4.33138 0.0 13.4967   Low
cufflinks 12.9095 0.0 35.4743   High
cufflinks 6.10962 0.0 18.1744    
cufflinks 10.5575 0.0 29.283    
cufflinks 6.02133 0.0 17.8742    
cufflinks 4.36718 0.0 13.5723   Low
cufflinks 7.0566 0.0 20.5632    
cufflinks 8.62066 0.0 24.4477    
cufflinks 4.589        
cufflinks 18.998     High High
cufflinks 6.913        
cufflinks 4.057        
cufflinks 4.688        
cufflinks 11.375     High  
cufflinks 4.713        
cufflinks 7.834     High  
cufflinks 4.311        
cufflinks 3.484        
cufflinks 4.617        
cufflinks 21.132     High High
cufflinks 3.805        
cufflinks 3.067       Low
cufflinks 21.343     High High
cufflinks 3.715        
cufflinks 12.738     High  

0 Strain