Gene : Glyma.03G200200 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR33057:SF17 - GB Genomic Order:  2002
Name:  ? Glyma.03G200200 Secondary Identifier:  ? PAC:30516010
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G200200 0.5kb upstream 0.5kb upstream 1073 true Chr03: 40913262-40914334 Glycine max
Glyma.03G200200 0.5kb upstream 0.5kb upstream 500 false Chr03: 40913835-40914334 Glycine max
Glyma.03G200200 0.5kb downstream 0.5kb downstream 1073 true Chr03: 40912762-40913834 Glycine max
Glyma.03G200200 0.5kb downstream 0.5kb downstream 500 false Chr03: 40912762-40913261 Glycine max
Glyma.03G200200 1.0kb upstream 1.0kb upstream 1573 true Chr03: 40913262-40914834 Glycine max
Glyma.03G200200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40913835-40914834 Glycine max
Glyma.03G200200 1.0kb downstream 1.0kb downstream 1573 true Chr03: 40912262-40913834 Glycine max
Glyma.03G200200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40912262-40913261 Glycine max
Glyma.03G200200 2.0kb upstream 2.0kb upstream 2573 true Chr03: 40913262-40915834 Glycine max
Glyma.03G200200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40913835-40915834 Glycine max
Glyma.03G200200 2.0kb downstream 2.0kb downstream 2573 true Chr03: 40911262-40913834 Glycine max
Glyma.03G200200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40911262-40913261 Glycine max
Glyma.03G200200 5.0kb upstream 5.0kb upstream 5573 true Chr03: 40913262-40918834 Glycine max
Glyma.03G200200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40913835-40918834 Glycine max
Glyma.03G200200 5.0kb downstream 5.0kb downstream 5573 true Chr03: 40908262-40913834 Glycine max
Glyma.03G200200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40908262-40913261 Glycine max
Glyma.03G200200 10.0kb upstream 10.0kb upstream 10573 true Chr03: 40913262-40923834 Glycine max
Glyma.03G200200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40913835-40923834 Glycine max
Glyma.03G200200 10.0kb downstream 10.0kb downstream 10573 true Chr03: 40903262-40913834 Glycine max
Glyma.03G200200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40903262-40913261 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315278 5265 Fabidae View MSA
124070173 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0441749 0.0 0.199782 Low Low
cufflinks 0.827744 0.0 3.17221    
cufflinks 1.5634 0.0 5.82286    
cufflinks 0.526177 0.0 2.05404    
cufflinks 0.695525 0.0 2.68152    
cufflinks 0.741739 0.0 2.85468    
cufflinks 3.09073 0.0 11.0138    
cufflinks 0.380324 0.0 1.50077    
cufflinks 10.1667 0.0 31.798   High
cufflinks 0.233        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.647       High
cufflinks 0.89        
cufflinks 0.306        
cufflinks 0.432        
cufflinks 0.237        
cufflinks 0.128        
cufflinks 1.671       High
cufflinks 1.482       High
cufflinks 0.094     Low Low
cufflinks 0.073       Low
cufflinks 0.232        
cufflinks 0.688        
cufflinks 0.031     Low Low
cufflinks 0.228        
cufflinks 0.385        

0 Strain