Gene : Glyma.03G198700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR14009//PTHR14009:SF4 - LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1987
Name:  ? Glyma.03G198700 Secondary Identifier:  ? PAC:30518959
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G198700 0.5kb upstream 0.5kb upstream 7531 true Chr03: 40784034-40791564 Glycine max
Glyma.03G198700 0.5kb upstream 0.5kb upstream 500 false Chr03: 40784034-40784533 Glycine max
Glyma.03G198700 0.5kb downstream 0.5kb downstream 7531 true Chr03: 40784534-40792064 Glycine max
Glyma.03G198700 0.5kb downstream 0.5kb downstream 500 false Chr03: 40791565-40792064 Glycine max
Glyma.03G198700 1.0kb upstream 1.0kb upstream 8031 true Chr03: 40783534-40791564 Glycine max
Glyma.03G198700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40783534-40784533 Glycine max
Glyma.03G198700 1.0kb downstream 1.0kb downstream 8031 true Chr03: 40784534-40792564 Glycine max
Glyma.03G198700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40791565-40792564 Glycine max
Glyma.03G198700 2.0kb upstream 2.0kb upstream 9031 true Chr03: 40782534-40791564 Glycine max
Glyma.03G198700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40782534-40784533 Glycine max
Glyma.03G198700 2.0kb downstream 2.0kb downstream 9031 true Chr03: 40784534-40793564 Glycine max
Glyma.03G198700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40791565-40793564 Glycine max
Glyma.03G198700 5.0kb upstream 5.0kb upstream 12031 true Chr03: 40779534-40791564 Glycine max
Glyma.03G198700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40779534-40784533 Glycine max
Glyma.03G198700 5.0kb downstream 5.0kb downstream 12031 true Chr03: 40784534-40796564 Glycine max
Glyma.03G198700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40791565-40796564 Glycine max
Glyma.03G198700 10.0kb upstream 10.0kb upstream 17031 true Chr03: 40774534-40791564 Glycine max
Glyma.03G198700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40774534-40784533 Glycine max
Glyma.03G198700 10.0kb downstream 10.0kb downstream 17031 true Chr03: 40784534-40801564 Glycine max
Glyma.03G198700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40791565-40801564 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121611863 5273 Angiosperm Singleton cluster - no MSA
122245161 5265 Fabidae Singleton cluster - no MSA
123989346 5270 Rosid Singleton cluster - no MSA
123564462 5271 Pentapetalae Singleton cluster - no MSA
122599232 5272 Eudicot Singleton cluster - no MSA
120884090 5274 Embryophyte Singleton cluster - no MSA
122924899 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.418972 0.0 2.78305    
cufflinks 0.53529 0.0 2.41151   High
cufflinks 0.450999 0.0 2.94422    
cufflinks 0.322632 0.0 2.20542    
cufflinks 0.0981431 0.0 0.386449 Low Low
cufflinks 0.208864 0.0 1.0132 Low  
cufflinks 0.0531503 0.0 0.214238 Low Low
cufflinks 0.379796 0.0 2.43342    
cufflinks 0.207135 0.0 1.43212 Low  
cufflinks 0.123        
cufflinks 0.024     Low  
cufflinks 0.215       High
cufflinks 0.024     Low  
cufflinks 0.013     Low Low
cufflinks 0.012     Low Low
cufflinks 0.076     Low  
cufflinks 0.085        
cufflinks 0.238       High
cufflinks 0.338       High
cufflinks 0.07     Low  
cufflinks 0.015     Low Low
cufflinks 0.077     Low  
cufflinks 0.143        
cufflinks 0.028     Low  
cufflinks 0.076     Low  
cufflinks 0.015     Low Low

0 Strain