Gene : Glyma.03G197200 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  1972
Name:  ? Glyma.03G197200 Secondary Identifier:  ? PAC:30518305
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G197200 0.5kb upstream 0.5kb upstream 1339 true Chr03: 40664080-40665418 Glycine max
Glyma.03G197200 0.5kb upstream 0.5kb upstream 500 false Chr03: 40664080-40664579 Glycine max
Glyma.03G197200 0.5kb downstream 0.5kb downstream 1339 true Chr03: 40664580-40665918 Glycine max
Glyma.03G197200 0.5kb downstream 0.5kb downstream 500 false Chr03: 40665419-40665918 Glycine max
Glyma.03G197200 1.0kb upstream 1.0kb upstream 1839 true Chr03: 40663580-40665418 Glycine max
Glyma.03G197200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40663580-40664579 Glycine max
Glyma.03G197200 1.0kb downstream 1.0kb downstream 1839 true Chr03: 40664580-40666418 Glycine max
Glyma.03G197200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40665419-40666418 Glycine max
Glyma.03G197200 2.0kb upstream 2.0kb upstream 2839 true Chr03: 40662580-40665418 Glycine max
Glyma.03G197200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40662580-40664579 Glycine max
Glyma.03G197200 2.0kb downstream 2.0kb downstream 2839 true Chr03: 40664580-40667418 Glycine max
Glyma.03G197200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40665419-40667418 Glycine max
Glyma.03G197200 5.0kb upstream 5.0kb upstream 5839 true Chr03: 40659580-40665418 Glycine max
Glyma.03G197200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40659580-40664579 Glycine max
Glyma.03G197200 5.0kb downstream 5.0kb downstream 5839 true Chr03: 40664580-40670418 Glycine max
Glyma.03G197200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40665419-40670418 Glycine max
Glyma.03G197200 10.0kb upstream 10.0kb upstream 10839 true Chr03: 40654580-40665418 Glycine max
Glyma.03G197200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40654580-40664579 Glycine max
Glyma.03G197200 10.0kb downstream 10.0kb downstream 10839 true Chr03: 40664580-40675418 Glycine max
Glyma.03G197200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40665419-40675418 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298890 5265 Fabidae View MSA
124068119 5270 Rosid View MSA
123749819 5271 Pentapetalae View MSA
122788630 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.79224 0.0 29.6801    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.912287 0.0 3.43749    
cufflinks 21.0086 0.0 58.1054   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0324858 0.0 0.147029 Low Low
cufflinks 0.978043 0.0 3.66872    
cufflinks 0.034     Low Low
cufflinks 0.966        
cufflinks 0.23        
cufflinks 0.775        
cufflinks 0.072     Low Low
cufflinks 0.623        
cufflinks 0.345        
cufflinks 1.56        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.092     Low Low
cufflinks 0.146        
cufflinks 1.515        
cufflinks 1.039        
cufflinks 0.373        
cufflinks 5.045       High
cufflinks 0.132        
cufflinks 1.742       High

0 Strain